Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 ACTG1P4-201ENST00000425123 1122 ntBASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 CHCHD2P8-201ENST00000429873 447 ntBASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 AC091607.1-201ENST00000490318 1060 ntBASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMSS1Q9BQ75 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.33□□□□□ -0.11
CMSS1Q9BQ75 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CMSS1Q9BQ75 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CMSS1Q9BQ75 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CMSS1Q9BQ75 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CMSS1Q9BQ75 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 DUX4L26-201ENST00000489078 1255 ntBASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 NTF6B-201ENST00000591913 560 ntBASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.33□□□□□ -0.12
CMSS1Q9BQ75 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 AL020989.1-201ENST00000422979 469 ntBASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.32□□□□□ -0.12
CMSS1Q9BQ75 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms