Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC006538.3-201ENST00000612495 578 ntBASIC14.83□□□□□ -0.04
VRK1Q99986 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.83□□□□□ -0.04
VRK1Q99986 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.83□□□□□ -0.04
VRK1Q99986 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
VRK1Q99986 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VRK1Q99986 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VRK1Q99986 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 BX842568.4-201ENST00000421222 227 ntBASIC14.82□□□□□ -0.04
VRK1Q99986 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
VRK1Q99986 AC108751.1-201ENST00000490852 363 ntBASIC14.82□□□□□ -0.04
VRK1Q99986 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.82□□□□□ -0.04
VRK1Q99986 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.82□□□□□ -0.04
VRK1Q99986 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 AC004706.3-202ENST00000621574 984 ntBASIC14.82□□□□□ -0.04
VRK1Q99986 LINC01451-201ENST00000623792 534 ntBASIC14.82□□□□□ -0.04
VRK1Q99986 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.82□□□□□ -0.04
VRK1Q99986 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK1Q99986 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VRK1Q99986 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK1Q99986 AC009336.1-201ENST00000608941 1553 ntBASIC14.81□□□□□ -0.04
VRK1Q99986 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VRK1Q99986 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK1Q99986 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.81□□□□□ -0.04
VRK1Q99986 KRT18P27-201ENST00000427733 1299 ntBASIC14.81□□□□□ -0.04
VRK1Q99986 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 AC009947.1-201ENST00000444350 727 ntBASIC14.81□□□□□ -0.04
VRK1Q99986 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.81□□□□□ -0.04
VRK1Q99986 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.81□□□□□ -0.04
VRK1Q99986 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK1Q99986 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK1Q99986 AC026691.1-201ENST00000602502 2017 ntBASIC14.81□□□□□ -0.04
VRK1Q99986 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VRK1Q99986 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK1Q99986 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK1Q99986 AC006504.4-201ENST00000592118 1568 ntBASIC14.81□□□□□ -0.04
VRK1Q99986 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms