Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBGCP6Q96RT7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBGCP6Q96RT7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 AC105021.1-202ENST00000570572 669 ntBASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 AC099568.2-201ENST00000609194 695 ntBASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBGCP6Q96RT7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 LINC02012-201ENST00000608206 1725 ntBASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 AC114501.2-201ENST00000439631 535 ntBASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 TPRX2P-201ENST00000535362 881 ntBASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 AC068587.10-201ENST00000641210 219 ntBASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 AC073439.1-201ENST00000624121 1774 ntBASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TUBGCP6Q96RT7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 AC011495.1-201ENST00000498085 584 ntBASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TUBGCP6Q96RT7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 CROCCP4-201ENST00000457096 498 ntBASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 DOC2GP-202ENST00000514950 1163 ntBASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 WFDC1-204ENST00000613603 549 ntBASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 KRT8P44-201ENST00000441609 1350 ntBASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 AC092053.1-201ENST00000605787 1936 ntBASIC21.09■□□□□ 0.97
TUBGCP6Q96RT7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms