Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 AC025580.3-201ENST00000617932 1424 ntBASIC19.37■□□□□ 0.69
PGBD1Q96JS3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 AC092865.5-201ENST00000545435 363 ntBASIC19.37■□□□□ 0.69
PGBD1Q96JS3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PGBD1Q96JS3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.36■□□□□ 0.69
PGBD1Q96JS3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 RHOQP3-201ENST00000437982 621 ntBASIC19.36■□□□□ 0.69
PGBD1Q96JS3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 KRT19P2-202ENST00000557173 1012 ntBASIC19.36■□□□□ 0.69
PGBD1Q96JS3 AC040169.1-201ENST00000565382 521 ntBASIC19.36■□□□□ 0.69
PGBD1Q96JS3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.36■□□□□ 0.69
PGBD1Q96JS3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 AL513480.1-201ENST00000451731 511 ntBASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms