Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 TSPY26P-202ENST00000565928 3884 ntBASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 IER3-202ENST00000376377 1350 ntBASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 CLEC4GP1-201ENST00000596555 870 ntBASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.38■□□□□ 0.69
CHAMP1Q96JM3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHAMP1Q96JM3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 AC132008.2-207ENST00000454517 770 ntBASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 AC138894.3-201ENST00000603787 634 ntBASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 AC006449.6-201ENST00000612330 2296 ntBASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 AC104640.1-201ENST00000562617 2109 ntBASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHAMP1Q96JM3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 AP005117.1-201ENST00000584346 1413 ntBASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms