Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 Z69720.1-201ENST00000601483 472 ntBASIC15.92■□□□□ 0.14
LRRC58Q96CX6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC58Q96CX6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 TOP3BP1-201ENST00000420768 1380 ntBASIC15.91■□□□□ 0.14
LRRC58Q96CX6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AC016734.2-201ENST00000624325 1377 ntBASIC15.91■□□□□ 0.14
LRRC58Q96CX6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 KRT18P35-201ENST00000510488 1269 ntBASIC15.91■□□□□ 0.14
LRRC58Q96CX6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AC073592.4-201ENST00000623827 446 ntBASIC15.91■□□□□ 0.14
LRRC58Q96CX6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC58Q96CX6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms