Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SGCDQ92629 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SGCDQ92629 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SGCDQ92629 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SGCDQ92629 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SGCDQ92629 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SGCDQ92629 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.32■□□□□ 0.04
SGCDQ92629 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.32■□□□□ 0.04
SGCDQ92629 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SGCDQ92629 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SGCDQ92629 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SGCDQ92629 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SGCDQ92629 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.31■□□□□ 0.04
SGCDQ92629 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.31■□□□□ 0.04
SGCDQ92629 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.31■□□□□ 0.04
SGCDQ92629 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SGCDQ92629 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SGCDQ92629 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.31■□□□□ 0.04
SGCDQ92629 MMP23A-201ENST00000234610 1017 ntBASIC15.31■□□□□ 0.04
SGCDQ92629 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.31■□□□□ 0.04
SGCDQ92629 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.31■□□□□ 0.04
SGCDQ92629 C2orf69P3-201ENST00000565542 1120 ntBASIC15.31■□□□□ 0.04
SGCDQ92629 STK25P1-201ENST00000585406 838 ntBASIC15.31■□□□□ 0.04
SGCDQ92629 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SGCDQ92629 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.31■□□□□ 0.04
SGCDQ92629 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 LINC00895-201ENST00000629028 1637 ntBASIC15.31■□□□□ 0.04
SGCDQ92629 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.31■□□□□ 0.04
SGCDQ92629 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.31■□□□□ 0.04
SGCDQ92629 AC006449.6-201ENST00000612330 2296 ntBASIC15.31■□□□□ 0.04
SGCDQ92629 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGCDQ92629 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.3■□□□□ 0.04
SGCDQ92629 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 IGHGP-201ENST00000390555 1178 ntBASIC15.3■□□□□ 0.04
SGCDQ92629 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.3■□□□□ 0.04
SGCDQ92629 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 AL353692.3-201ENST00000407031 1396 ntBASIC15.3■□□□□ 0.04
SGCDQ92629 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SGCDQ92629 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.3■□□□□ 0.04
SGCDQ92629 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.3■□□□□ 0.04
SGCDQ92629 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 KRT18P35-201ENST00000510488 1269 ntBASIC15.3■□□□□ 0.04
SGCDQ92629 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.3■□□□□ 0.04
SGCDQ92629 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SGCDQ92629 RN7SL850P-201ENST00000579959 291 ntBASIC15.3■□□□□ 0.04
SGCDQ92629 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 AL590326.2-201ENST00000625139 305 ntBASIC15.3■□□□□ 0.04
SGCDQ92629 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SGCDQ92629 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGCDQ92629 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.3■□□□□ 0.04
SGCDQ92629 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms