Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ALOX12P2-203ENST00000570921 1945 ntBASIC11.31□□□□□ -0.6
COPS9Q8WXC6 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COPS9Q8WXC6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 SLC25A1P2-201ENST00000430693 912 ntBASIC11.3□□□□□ -0.6
COPS9Q8WXC6 TSPY6P-201ENST00000448518 926 ntBASIC11.3□□□□□ -0.6
COPS9Q8WXC6 AC097488.1-201ENST00000507834 756 ntBASIC11.3□□□□□ -0.6
COPS9Q8WXC6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 AP003097.1-201ENST00000530657 1135 ntBASIC11.3□□□□□ -0.6
COPS9Q8WXC6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 AC111152.3-201ENST00000569699 673 ntBASIC11.3□□□□□ -0.6
COPS9Q8WXC6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC11.3□□□□□ -0.6
COPS9Q8WXC6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms