Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 FAM220CP-201ENST00000395253 831 ntBASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 AC005336.2-201ENST00000593183 939 ntBASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 GGT4P-201ENST00000623672 1708 ntBASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 GGT3P-204ENST00000453783 1664 ntBASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD2Q8NHY2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 VENTXP5-201ENST00000523979 775 ntBASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD2Q8NHY2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD2Q8NHY2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms