Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 AC064836.3-201ENST00000607928 673 ntBASIC17.19■□□□□ 0.34
PAF1Q8N7H5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAF1Q8N7H5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 AC108860.2-201ENST00000562760 2183 ntBASIC17.18■□□□□ 0.34
PAF1Q8N7H5 AC079328.2-201ENST00000561241 3354 ntBASIC17.18■□□□□ 0.34
PAF1Q8N7H5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.18■□□□□ 0.34
PAF1Q8N7H5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 PRSS29P-201ENST00000440800 595 ntBASIC17.18■□□□□ 0.34
PAF1Q8N7H5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAF1Q8N7H5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.17■□□□□ 0.34
PAF1Q8N7H5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms