Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 FAM220CP-201ENST00000395253 831 ntBASIC13.94□□□□□ -0.18
COMMD1Q8N668 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 RBM17P3-201ENST00000417687 1192 ntBASIC13.94□□□□□ -0.18
COMMD1Q8N668 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 REXO1L6P-202ENST00000619970 1078 ntBASIC13.94□□□□□ -0.18
COMMD1Q8N668 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 AC046185.3-201ENST00000623228 1824 ntBASIC13.94□□□□□ -0.18
COMMD1Q8N668 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 AC132938.6-201ENST00000623828 1655 ntBASIC13.94□□□□□ -0.18
COMMD1Q8N668 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD1Q8N668 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD1Q8N668 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 LINC02228-204ENST00000642115 2962 ntBASIC13.93□□□□□ -0.18
COMMD1Q8N668 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 AC026396.1-201ENST00000419388 421 ntBASIC13.93□□□□□ -0.18
COMMD1Q8N668 AC096633.1-201ENST00000422446 749 ntBASIC13.93□□□□□ -0.18
COMMD1Q8N668 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD1Q8N668 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
COMMD1Q8N668 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms