Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD4Q7Z3J3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.68■□□□□ 0.9
RGPD4Q7Z3J3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RGPD4Q7Z3J3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD4Q7Z3J3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD4Q7Z3J3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD4Q7Z3J3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AZGP1P1-201ENST00000411909 902 ntBASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 MIR3619-201ENST00000579667 83 ntBASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 BTBD6P1-201ENST00000412176 1267 ntBASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AC134915.1-201ENST00000426461 574 ntBASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AC022137.2-201ENST00000503482 481 ntBASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AP006547.1-201ENST00000563435 692 ntBASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD4Q7Z3J3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 AL591846.1-201ENST00000451736 433 ntBASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 CLUHP6-201ENST00000580789 941 ntBASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 AC138627.1-207ENST00000641560 1006 ntBASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 AL139011.1-202ENST00000642063 584 ntBASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.66■□□□□ 0.9
RGPD4Q7Z3J3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 AL662890.1-201ENST00000396818 632 ntBASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 HIST2H2BC-201ENST00000498492 580 ntBASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD4Q7Z3J3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms