Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 AC005412.3-201ENST00000580309 715 ntBASIC15.4■□□□□ 0.06
ZNF550Q7Z398 MIR4492-201ENST00000581627 80 ntBASIC15.4■□□□□ 0.06
ZNF550Q7Z398 AL356488.2-201ENST00000602755 427 ntBASIC15.4■□□□□ 0.06
ZNF550Q7Z398 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 PCDHB19P-201ENST00000570871 2371 ntBASIC15.4■□□□□ 0.06
ZNF550Q7Z398 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF550Q7Z398 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 KRT18P13-201ENST00000400056 1290 ntBASIC15.39■□□□□ 0.05
ZNF550Q7Z398 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 RNA5SP415-201ENST00000517246 115 ntBASIC15.39■□□□□ 0.05
ZNF550Q7Z398 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 IGHV3-65-201ENST00000523210 341 ntBASIC15.39■□□□□ 0.05
ZNF550Q7Z398 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 AC117500.6-201ENST00000624871 588 ntBASIC15.39■□□□□ 0.05
ZNF550Q7Z398 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 PMS2P7-201ENST00000506558 1336 ntBASIC15.39■□□□□ 0.05
ZNF550Q7Z398 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF550Q7Z398 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 KRT8P39-201ENST00000396270 1433 ntBASIC15.38■□□□□ 0.05
ZNF550Q7Z398 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.38■□□□□ 0.05
ZNF550Q7Z398 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF550Q7Z398 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms