Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 KLF4P1-201ENST00000412782 1185 ntBASIC11.13□□□□□ -0.63
SCXQ7RTU7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 AC009947.1-201ENST00000444350 727 ntBASIC11.13□□□□□ -0.63
SCXQ7RTU7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 AC136632.2-201ENST00000512891 861 ntBASIC11.13□□□□□ -0.63
SCXQ7RTU7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 AC116407.2-201ENST00000613639 860 ntBASIC11.13□□□□□ -0.63
SCXQ7RTU7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 PGM5P2-202ENST00000637225 1043 ntBASIC11.13□□□□□ -0.63
SCXQ7RTU7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 FLJ38576-201ENST00000623820 2459 ntBASIC11.13□□□□□ -0.63
SCXQ7RTU7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.13□□□□□ -0.63
SCXQ7RTU7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SCXQ7RTU7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC103702.1-201ENST00000548801 2630 ntBASIC11.12□□□□□ -0.63
SCXQ7RTU7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms