Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 AC008494.3-201ENST00000606615 944 ntBASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 AL353732.1-201ENST00000569618 1459 ntBASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 AC119751.2-201ENST00000504529 210 ntBASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 AC135586.1-201ENST00000539323 574 ntBASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 CHCHD2P3-201ENST00000603038 451 ntBASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 AL512343.1-201ENST00000605837 169 ntBASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
OTOP1Q7RTM1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 AC124947.2-201ENST00000547118 1133 ntBASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 MIR3909-201ENST00000579518 119 ntBASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.17■□□□□ 0.66
OTOP1Q7RTM1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 HCG4-201ENST00000418983 998 ntBASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms