Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 KRT18P13-201ENST00000400056 1290 ntBASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 PMS2P1-201ENST00000431037 1228 ntBASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 AF186996.4-201ENST00000467186 377 ntBASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 AL671883.3-201ENST00000603274 991 ntBASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXR1Q6PIV2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 AC093909.1-201ENST00000504731 1122 ntBASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 SLC25A1P1-201ENST00000528351 927 ntBASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 AC092865.5-201ENST00000545435 363 ntBASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 FAM45BP-202ENST00000592932 1624 ntBASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXR1Q6PIV2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
FOXR1Q6PIV2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 MIR5100-201ENST00000579544 119 ntBASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms