Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 AC092068.3-201ENST00000587894 2016 ntBASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 KRT16P4-201ENST00000453883 522 ntBASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 PRELID1P1-202ENST00000567272 903 ntBASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 AP002414.2-201ENST00000591780 3365 ntBASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 AC005104.2-201ENST00000427818 678 ntBASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 NUS1P1-201ENST00000446295 882 ntBASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 AL121772.3-201ENST00000610840 674 ntBASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 LINC00304-203ENST00000565008 1864 ntBASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 AC079328.2-201ENST00000561241 3354 ntBASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEM53Q6P2H8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 AL355312.1-201ENST00000407115 2176 ntBASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 RCN1P2-201ENST00000398357 915 ntBASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 AC109462.3-201ENST00000573934 613 ntBASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 AL591684.3-201ENST00000605187 298 ntBASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TMEM53Q6P2H8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms