Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 AC008741.2-201ENST00000612792 3115 ntBASIC17.53■□□□□ 0.4
RNF43Q68DV7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 AC103702.1-201ENST00000548801 2630 ntBASIC17.52■□□□□ 0.4
RNF43Q68DV7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 AC129492.6-201ENST00000611383 1305 ntBASIC17.52■□□□□ 0.4
RNF43Q68DV7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 KRT19P2-202ENST00000557173 1012 ntBASIC17.52■□□□□ 0.4
RNF43Q68DV7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF43Q68DV7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF43Q68DV7 AC006449.5-201ENST00000610658 2098 ntBASIC17.52■□□□□ 0.39
RNF43Q68DV7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RNF43Q68DV7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF43Q68DV7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF43Q68DV7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF43Q68DV7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF43Q68DV7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 CEND1P1-201ENST00000451006 455 ntBASIC17.51■□□□□ 0.39
RNF43Q68DV7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 SPCS2P1-201ENST00000561636 679 ntBASIC17.51■□□□□ 0.39
RNF43Q68DV7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 AC004877.2-201ENST00000623941 599 ntBASIC17.51■□□□□ 0.39
RNF43Q68DV7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF43Q68DV7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF43Q68DV7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms