Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 MIR4785-201ENST00000585005 73 ntBASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 AC139749.1-202ENST00000617529 3139 ntBASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC6LQ2NKX8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 AL049757.1-201ENST00000616842 1596 ntBASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC6LQ2NKX8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 AP003071.4-201ENST00000562276 1284 ntBASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 AC010653.2-201ENST00000623505 997 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms