Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.32■□□□□ 0.52
NFX1Q12986 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NFX1Q12986 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
NFX1Q12986 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NFX1Q12986 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.31■□□□□ 0.52
NFX1Q12986 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.31■□□□□ 0.52
NFX1Q12986 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NFX1Q12986 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.31■□□□□ 0.52
NFX1Q12986 AL035633.1-201ENST00000406139 838 ntBASIC18.31■□□□□ 0.52
NFX1Q12986 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.31■□□□□ 0.52
NFX1Q12986 BASP1P1-201ENST00000430708 665 ntBASIC18.31■□□□□ 0.52
NFX1Q12986 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.31■□□□□ 0.52
NFX1Q12986 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.31■□□□□ 0.52
NFX1Q12986 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.31■□□□□ 0.52
NFX1Q12986 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.31■□□□□ 0.52
NFX1Q12986 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.31■□□□□ 0.52
NFX1Q12986 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.31■□□□□ 0.52
NFX1Q12986 MIR6080-201ENST00000617359 66 ntBASIC18.31■□□□□ 0.52
NFX1Q12986 AC084121.4-201ENST00000641598 221 ntBASIC18.31■□□□□ 0.52
NFX1Q12986 AF228730.8-201ENST00000642140 221 ntBASIC18.31■□□□□ 0.52
NFX1Q12986 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.31■□□□□ 0.52
NFX1Q12986 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NFX1Q12986 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NFX1Q12986 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.31■□□□□ 0.52
NFX1Q12986 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NFX1Q12986 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NFX1Q12986 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
NFX1Q12986 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.31■□□□□ 0.52
NFX1Q12986 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NFX1Q12986 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NFX1Q12986 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
NFX1Q12986 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.3■□□□□ 0.52
NFX1Q12986 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NFX1Q12986 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.3■□□□□ 0.52
NFX1Q12986 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.3■□□□□ 0.52
NFX1Q12986 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.3■□□□□ 0.52
NFX1Q12986 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.3■□□□□ 0.52
NFX1Q12986 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.3■□□□□ 0.52
NFX1Q12986 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.3■□□□□ 0.52
NFX1Q12986 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.3■□□□□ 0.52
NFX1Q12986 AP000842.3-202ENST00000569238 1080 ntBASIC18.3■□□□□ 0.52
NFX1Q12986 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NFX1Q12986 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.3■□□□□ 0.52
NFX1Q12986 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.3■□□□□ 0.52
NFX1Q12986 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.3■□□□□ 0.52
NFX1Q12986 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NFX1Q12986 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.3■□□□□ 0.52
NFX1Q12986 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
NFX1Q12986 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.3■□□□□ 0.52
NFX1Q12986 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFX1Q12986 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NFX1Q12986 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.29■□□□□ 0.52
NFX1Q12986 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NFX1Q12986 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.29■□□□□ 0.52
NFX1Q12986 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.29■□□□□ 0.52
NFX1Q12986 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NFX1Q12986 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.29■□□□□ 0.52
NFX1Q12986 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NFX1Q12986 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NFX1Q12986 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NFX1Q12986 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NFX1Q12986 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NFX1Q12986 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NFX1Q12986 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms