Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP1Q04837 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SSBP1Q04837 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SSBP1Q04837 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.15□□□□□ -0.14
SSBP1Q04837 KRT8P39-201ENST00000396270 1433 ntBASIC14.15□□□□□ -0.14
SSBP1Q04837 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP1Q04837 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
SSBP1Q04837 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP1Q04837 SNX33P1-201ENST00000592116 1762 ntBASIC14.15□□□□□ -0.14
SSBP1Q04837 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SSBP1Q04837 COX11P1-201ENST00000489116 835 ntBASIC14.15□□□□□ -0.14
SSBP1Q04837 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP1Q04837 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP1Q04837 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP1Q04837 AL136379.1-201ENST00000623471 2642 ntBASIC14.15□□□□□ -0.14
SSBP1Q04837 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP1Q04837 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SSBP1Q04837 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP1Q04837 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.15□□□□□ -0.14
SSBP1Q04837 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP1Q04837 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP1Q04837 KRT18P22-201ENST00000402024 1347 ntBASIC14.15□□□□□ -0.15
SSBP1Q04837 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP1Q04837 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SSBP1Q04837 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.14□□□□□ -0.15
SSBP1Q04837 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.14□□□□□ -0.15
SSBP1Q04837 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.14□□□□□ -0.15
SSBP1Q04837 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SSBP1Q04837 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SSBP1Q04837 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP1Q04837 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 RN7SL606P-201ENST00000472779 293 ntBASIC14.14□□□□□ -0.15
SSBP1Q04837 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP1Q04837 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SSBP1Q04837 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSBP1Q04837 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP1Q04837 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SSBP1Q04837 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms