Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 KRT8P49-201ENST00000604166 1432 ntBASIC15.33■□□□□ 0.04
CDC42P60953 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC42P60953 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 AC006277.1-201ENST00000624348 1610 ntBASIC15.32■□□□□ 0.04
CDC42P60953 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 AC126177.1-201ENST00000547829 2218 ntBASIC15.32■□□□□ 0.04
CDC42P60953 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.32■□□□□ 0.04
CDC42P60953 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC42P60953 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC42P60953 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 GGT3P-204ENST00000453783 1664 ntBASIC15.32■□□□□ 0.04
CDC42P60953 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC42P60953 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 GGT4P-201ENST00000623672 1708 ntBASIC15.31■□□□□ 0.04
CDC42P60953 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC42P60953 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC42P60953 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 AC006449.6-201ENST00000612330 2296 ntBASIC15.31■□□□□ 0.04
CDC42P60953 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC42P60953 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC42P60953 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC42P60953 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 AC087499.1-201ENST00000418141 1075 ntBASIC15.31■□□□□ 0.04
CDC42P60953 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.31■□□□□ 0.04
CDC42P60953 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDC42P60953 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC42P60953 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDC42P60953 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.31■□□□□ 0.04
CDC42P60953 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDC42P60953 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDC42P60953 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDC42P60953 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC42P60953 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42P60953 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC42P60953 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC42P60953 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC42P60953 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms