Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.78■■□□□ 1.08
RIPK4P57078 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK4P57078 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 AC069335.1-201ENST00000489972 472 ntBASIC21.78■■□□□ 1.08
RIPK4P57078 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK4P57078 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.78■■□□□ 1.08
RIPK4P57078 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 GPAA1P2-202ENST00000606848 1787 ntBASIC21.78■■□□□ 1.08
RIPK4P57078 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK4P57078 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK4P57078 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RIPK4P57078 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.77■■□□□ 1.08
RIPK4P57078 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
RIPK4P57078 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
RIPK4P57078 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.77■■□□□ 1.08
RIPK4P57078 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.77■■□□□ 1.08
RIPK4P57078 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.77■■□□□ 1.08
RIPK4P57078 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.77■■□□□ 1.08
RIPK4P57078 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.77■■□□□ 1.08
RIPK4P57078 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.77■■□□□ 1.08
RIPK4P57078 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.77■■□□□ 1.08
RIPK4P57078 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.77■■□□□ 1.08
RIPK4P57078 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.77■■□□□ 1.08
RIPK4P57078 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK4P57078 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.77■■□□□ 1.07
RIPK4P57078 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RIPK4P57078 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RIPK4P57078 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.76■■□□□ 1.07
RIPK4P57078 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.76■■□□□ 1.07
RIPK4P57078 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.76■■□□□ 1.07
RIPK4P57078 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RIPK4P57078 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.76■■□□□ 1.07
RIPK4P57078 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.76■■□□□ 1.07
RIPK4P57078 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
RIPK4P57078 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.76■■□□□ 1.07
RIPK4P57078 AC027307.2-201ENST00000591252 911 ntBASIC21.76■■□□□ 1.07
RIPK4P57078 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.76■■□□□ 1.07
RIPK4P57078 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.76■■□□□ 1.07
RIPK4P57078 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.76■■□□□ 1.07
RIPK4P57078 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.76■■□□□ 1.07
RIPK4P57078 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK4P57078 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RIPK4P57078 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RIPK4P57078 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.75■■□□□ 1.07
RIPK4P57078 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.75■■□□□ 1.07
RIPK4P57078 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.75■■□□□ 1.07
RIPK4P57078 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.75■■□□□ 1.07
RIPK4P57078 AL627223.1-201ENST00000416693 442 ntBASIC21.75■■□□□ 1.07
RIPK4P57078 FAM58DP-201ENST00000428076 619 ntBASIC21.75■■□□□ 1.07
RIPK4P57078 AC005237.2-201ENST00000434368 219 ntBASIC21.75■■□□□ 1.07
RIPK4P57078 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.75■■□□□ 1.07
RIPK4P57078 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms