Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.65■□□□□ 0.42
GSCP56915 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GSCP56915 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GSCP56915 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GSCP56915 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GSCP56915 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GSCP56915 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.65■□□□□ 0.42
GSCP56915 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GSCP56915 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GSCP56915 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.64■□□□□ 0.42
GSCP56915 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GSCP56915 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GSCP56915 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
GSCP56915 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GSCP56915 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
GSCP56915 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.64■□□□□ 0.41
GSCP56915 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.64■□□□□ 0.41
GSCP56915 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.64■□□□□ 0.41
GSCP56915 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.64■□□□□ 0.41
GSCP56915 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.64■□□□□ 0.41
GSCP56915 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 AP001350.2-201ENST00000625104 1094 ntBASIC17.64■□□□□ 0.41
GSCP56915 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GSCP56915 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 GGT3P-204ENST00000453783 1664 ntBASIC17.64■□□□□ 0.41
GSCP56915 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.64■□□□□ 0.41
GSCP56915 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.64■□□□□ 0.41
GSCP56915 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSCP56915 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
GSCP56915 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
GSCP56915 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GSCP56915 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.63■□□□□ 0.41
GSCP56915 IGLL3P-201ENST00000412472 434 ntBASIC17.63■□□□□ 0.41
GSCP56915 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GSCP56915 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.63■□□□□ 0.41
GSCP56915 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 CXCL1P1-201ENST00000502804 216 ntBASIC17.63■□□□□ 0.41
GSCP56915 RNA5SP415-201ENST00000517246 115 ntBASIC17.63■□□□□ 0.41
GSCP56915 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.63■□□□□ 0.41
GSCP56915 AC145285.3-201ENST00000564603 959 ntBASIC17.63■□□□□ 0.41
GSCP56915 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.63■□□□□ 0.41
GSCP56915 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
GSCP56915 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.63■□□□□ 0.41
GSCP56915 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.63■□□□□ 0.41
GSCP56915 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
GSCP56915 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GSCP56915 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.63■□□□□ 0.41
GSCP56915 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.63■□□□□ 0.41
GSCP56915 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSCP56915 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSCP56915 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
GSCP56915 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.62■□□□□ 0.41
GSCP56915 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSCP56915 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
GSCP56915 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSCP56915 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
GSCP56915 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.62■□□□□ 0.41
GSCP56915 GGT4P-201ENST00000623672 1708 ntBASIC17.62■□□□□ 0.41
GSCP56915 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GSCP56915 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSCP56915 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.62■□□□□ 0.41
GSCP56915 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.62■□□□□ 0.41
GSCP56915 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.62■□□□□ 0.41
GSCP56915 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSCP56915 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.62■□□□□ 0.41
GSCP56915 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.62■□□□□ 0.41
GSCP56915 VN2R19P-201ENST00000442399 1052 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms