Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SLC1A6P48664 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SLC1A6P48664 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
SLC1A6P48664 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.46■□□□□ 0.23
SLC1A6P48664 BNIP3P18-201ENST00000593976 575 ntBASIC16.46■□□□□ 0.23
SLC1A6P48664 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SLC1A6P48664 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC1A6P48664 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.46■□□□□ 0.23
SLC1A6P48664 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 AC126177.1-201ENST00000547829 2218 ntBASIC16.46■□□□□ 0.23
SLC1A6P48664 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.46■□□□□ 0.22
SLC1A6P48664 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC1A6P48664 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.46■□□□□ 0.22
SLC1A6P48664 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC1A6P48664 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC1A6P48664 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.46■□□□□ 0.22
SLC1A6P48664 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC1A6P48664 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
SLC1A6P48664 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC1A6P48664 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC1A6P48664 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC1A6P48664 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC1A6P48664 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC1A6P48664 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SLC1A6P48664 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SLC1A6P48664 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.45■□□□□ 0.22
SLC1A6P48664 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC1A6P48664 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC1A6P48664 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC1A6P48664 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC1A6P48664 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC1A6P48664 Z69720.1-201ENST00000601483 472 ntBASIC16.45■□□□□ 0.22
SLC1A6P48664 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC1A6P48664 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC1A6P48664 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 AL031731.1-201ENST00000642131 2094 ntBASIC16.45■□□□□ 0.22
SLC1A6P48664 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC1A6P48664 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLC1A6P48664 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A6P48664 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC1A6P48664 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC1A6P48664 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC1A6P48664 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
SLC1A6P48664 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A6P48664 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC1A6P48664 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SLC1A6P48664 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 DBET-201ENST00000630918 3363 ntBASIC16.44■□□□□ 0.22
SLC1A6P48664 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC1A6P48664 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 AC016734.2-201ENST00000624325 1377 ntBASIC16.44■□□□□ 0.22
SLC1A6P48664 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A6P48664 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A6P48664 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A6P48664 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms