Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCC3P46736 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCC3P46736 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCC3P46736 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.68■□□□□ 0.42
BRCC3P46736 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
BRCC3P46736 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCC3P46736 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCC3P46736 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCC3P46736 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCC3P46736 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCC3P46736 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.68■□□□□ 0.42
BRCC3P46736 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCC3P46736 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCC3P46736 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCC3P46736 AL603756.1-201ENST00000606511 2163 ntBASIC17.68■□□□□ 0.42
BRCC3P46736 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCC3P46736 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCC3P46736 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCC3P46736 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCC3P46736 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BRCC3P46736 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCC3P46736 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCC3P46736 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
BRCC3P46736 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 IGHV3-42-201ENST00000520410 361 ntBASIC17.67■□□□□ 0.42
BRCC3P46736 AP002490.2-201ENST00000524791 560 ntBASIC17.67■□□□□ 0.42
BRCC3P46736 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.67■□□□□ 0.42
BRCC3P46736 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.67■□□□□ 0.42
BRCC3P46736 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCC3P46736 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
BRCC3P46736 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.67■□□□□ 0.42
BRCC3P46736 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCC3P46736 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCC3P46736 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCC3P46736 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCC3P46736 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
BRCC3P46736 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCC3P46736 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRCC3P46736 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCC3P46736 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.66■□□□□ 0.42
BRCC3P46736 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.66■□□□□ 0.42
BRCC3P46736 AC003101.2-201ENST00000612557 442 ntBASIC17.66■□□□□ 0.42
BRCC3P46736 AC018529.1-201ENST00000613063 361 ntBASIC17.66■□□□□ 0.42
BRCC3P46736 AL390754.1-201ENST00000619088 582 ntBASIC17.66■□□□□ 0.42
BRCC3P46736 AL139011.1-202ENST00000642063 584 ntBASIC17.66■□□□□ 0.42
BRCC3P46736 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRCC3P46736 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCC3P46736 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCC3P46736 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCC3P46736 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCC3P46736 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCC3P46736 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRCC3P46736 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms