Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.84■□□□□ 0.61
PRPHP41219 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.84■□□□□ 0.61
PRPHP41219 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.84■□□□□ 0.61
PRPHP41219 AL031055.1-201ENST00000606362 631 ntBASIC18.84■□□□□ 0.61
PRPHP41219 AC021097.1-201ENST00000607902 574 ntBASIC18.84■□□□□ 0.61
PRPHP41219 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.84■□□□□ 0.61
PRPHP41219 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.84■□□□□ 0.61
PRPHP41219 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPHP41219 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPHP41219 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRPHP41219 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.84■□□□□ 0.61
PRPHP41219 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PRPHP41219 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.84■□□□□ 0.61
PRPHP41219 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.84■□□□□ 0.61
PRPHP41219 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.84■□□□□ 0.61
PRPHP41219 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPHP41219 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRPHP41219 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.84■□□□□ 0.61
PRPHP41219 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRPHP41219 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPHP41219 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.83■□□□□ 0.61
PRPHP41219 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PRPHP41219 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PRPHP41219 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.83■□□□□ 0.61
PRPHP41219 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRPHP41219 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PRPHP41219 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPHP41219 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRPHP41219 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.83■□□□□ 0.6
PRPHP41219 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.83■□□□□ 0.6
PRPHP41219 AC007967.2-201ENST00000432613 625 ntBASIC18.83■□□□□ 0.6
PRPHP41219 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.83■□□□□ 0.6
PRPHP41219 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.83■□□□□ 0.6
PRPHP41219 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.83■□□□□ 0.6
PRPHP41219 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.83■□□□□ 0.6
PRPHP41219 FAM197Y3-203ENST00000618346 717 ntBASIC18.83■□□□□ 0.6
PRPHP41219 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRPHP41219 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.83■□□□□ 0.6
PRPHP41219 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
PRPHP41219 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPHP41219 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRPHP41219 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.83■□□□□ 0.6
PRPHP41219 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPHP41219 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRPHP41219 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PRPHP41219 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRPHP41219 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PRPHP41219 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.82■□□□□ 0.6
PRPHP41219 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PRPHP41219 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.82■□□□□ 0.6
PRPHP41219 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.82■□□□□ 0.6
PRPHP41219 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.82■□□□□ 0.6
PRPHP41219 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
PRPHP41219 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
PRPHP41219 AC109635.5-201ENST00000533593 962 ntBASIC18.82■□□□□ 0.6
PRPHP41219 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.82■□□□□ 0.6
PRPHP41219 AC027601.4-201ENST00000611259 610 ntBASIC18.82■□□□□ 0.6
PRPHP41219 AC020765.3-201ENST00000613051 740 ntBASIC18.82■□□□□ 0.6
PRPHP41219 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.82■□□□□ 0.6
PRPHP41219 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.82■□□□□ 0.6
PRPHP41219 AC004877.2-201ENST00000623941 599 ntBASIC18.82■□□□□ 0.6
PRPHP41219 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRPHP41219 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.82■□□□□ 0.6
PRPHP41219 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.82■□□□□ 0.6
PRPHP41219 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPHP41219 PCDHB19P-201ENST00000570871 2371 ntBASIC18.82■□□□□ 0.6
PRPHP41219 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.82■□□□□ 0.6
PRPHP41219 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRPHP41219 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PRPHP41219 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRPHP41219 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms