Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.92■□□□□ 0.3
RPA3P35244 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 AL596087.1-201ENST00000400979 1969 ntBASIC16.92■□□□□ 0.3
RPA3P35244 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
RPA3P35244 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.92■□□□□ 0.3
RPA3P35244 AL450487.1-201ENST00000426799 995 ntBASIC16.92■□□□□ 0.3
RPA3P35244 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RPA3P35244 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.92■□□□□ 0.3
RPA3P35244 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.92■□□□□ 0.3
RPA3P35244 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.92■□□□□ 0.3
RPA3P35244 AP001269.4-201ENST00000609611 512 ntBASIC16.92■□□□□ 0.3
RPA3P35244 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.92■□□□□ 0.3
RPA3P35244 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.92■□□□□ 0.3
RPA3P35244 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.92■□□□□ 0.3
RPA3P35244 AP000867.4-201ENST00000641616 219 ntBASIC16.92■□□□□ 0.3
RPA3P35244 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.92■□□□□ 0.3
RPA3P35244 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RPA3P35244 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RPA3P35244 LINC00895-201ENST00000629028 1637 ntBASIC16.92■□□□□ 0.3
RPA3P35244 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RPA3P35244 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RPA3P35244 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RPA3P35244 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 AC068418.2-201ENST00000577309 3703 ntBASIC16.91■□□□□ 0.3
RPA3P35244 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RPA3P35244 PMPCAP1-201ENST00000508114 1576 ntBASIC16.91■□□□□ 0.3
RPA3P35244 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RPA3P35244 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 AP005117.1-201ENST00000584346 1413 ntBASIC16.91■□□□□ 0.3
RPA3P35244 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.91■□□□□ 0.3
RPA3P35244 RBM17P3-201ENST00000417687 1192 ntBASIC16.91■□□□□ 0.3
RPA3P35244 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.91■□□□□ 0.3
RPA3P35244 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.91■□□□□ 0.3
RPA3P35244 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 KRT126P-201ENST00000549467 1181 ntBASIC16.91■□□□□ 0.3
RPA3P35244 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.91■□□□□ 0.3
RPA3P35244 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 DBET-201ENST00000630918 3363 ntBASIC16.91■□□□□ 0.3
RPA3P35244 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.91■□□□□ 0.3
RPA3P35244 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 AC104640.1-201ENST00000562617 2109 ntBASIC16.91■□□□□ 0.3
RPA3P35244 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.91■□□□□ 0.3
RPA3P35244 AC144831.1-201ENST00000573312 2656 ntBASIC16.91■□□□□ 0.3
RPA3P35244 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPA3P35244 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RPA3P35244 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.9■□□□□ 0.3
RPA3P35244 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RPA3P35244 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.9■□□□□ 0.3
RPA3P35244 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RPA3P35244 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RPA3P35244 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms