Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 BTBD7P1-201ENST00000447253 1453 ntBASIC18.4■□□□□ 0.54
SMPD1P17405 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SMPD1P17405 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SMPD1P17405 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SMPD1P17405 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.4■□□□□ 0.54
SMPD1P17405 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.4■□□□□ 0.54
SMPD1P17405 RN7SL618P-201ENST00000477850 296 ntBASIC18.4■□□□□ 0.54
SMPD1P17405 AC140912.1-201ENST00000577171 1054 ntBASIC18.4■□□□□ 0.54
SMPD1P17405 AC061975.2-201ENST00000581722 295 ntBASIC18.4■□□□□ 0.54
SMPD1P17405 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.4■□□□□ 0.54
SMPD1P17405 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SMPD1P17405 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SMPD1P17405 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SMPD1P17405 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SMPD1P17405 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMPD1P17405 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMPD1P17405 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.54
SMPD1P17405 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SMPD1P17405 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.39■□□□□ 0.54
SMPD1P17405 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMPD1P17405 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.39■□□□□ 0.53
SMPD1P17405 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.39■□□□□ 0.53
SMPD1P17405 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SMPD1P17405 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.39■□□□□ 0.53
SMPD1P17405 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.39■□□□□ 0.53
SMPD1P17405 KRT17P7-201ENST00000451704 1104 ntBASIC18.39■□□□□ 0.53
SMPD1P17405 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.39■□□□□ 0.53
SMPD1P17405 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.39■□□□□ 0.53
SMPD1P17405 AC044860.1-202ENST00000559481 777 ntBASIC18.39■□□□□ 0.53
SMPD1P17405 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.39■□□□□ 0.53
SMPD1P17405 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.39■□□□□ 0.53
SMPD1P17405 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SMPD1P17405 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.39■□□□□ 0.53
SMPD1P17405 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMPD1P17405 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.38■□□□□ 0.53
SMPD1P17405 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
SMPD1P17405 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
SMPD1P17405 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.38■□□□□ 0.53
SMPD1P17405 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SMPD1P17405 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SMPD1P17405 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.38■□□□□ 0.53
SMPD1P17405 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SMPD1P17405 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.38■□□□□ 0.53
SMPD1P17405 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.38■□□□□ 0.53
SMPD1P17405 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 SPDYE18-201ENST00000510091 1050 ntBASIC18.38■□□□□ 0.53
SMPD1P17405 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
SMPD1P17405 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.38■□□□□ 0.53
SMPD1P17405 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.38■□□□□ 0.53
SMPD1P17405 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SMPD1P17405 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.38■□□□□ 0.53
SMPD1P17405 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.38■□□□□ 0.53
SMPD1P17405 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.38■□□□□ 0.53
SMPD1P17405 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SMPD1P17405 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SMPD1P17405 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMPD1P17405 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMPD1P17405 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.37■□□□□ 0.53
SMPD1P17405 AL031731.1-201ENST00000642131 2094 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms