Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 FGFR3P6-201ENST00000457012 610 ntBASIC18.11■□□□□ 0.49
CCDC172P0C7W6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 REXO1L6P-202ENST00000619970 1078 ntBASIC18.1■□□□□ 0.49
CCDC172P0C7W6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC172P0C7W6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 AC006557.2-201ENST00000592985 1240 ntBASIC18.09■□□□□ 0.49
CCDC172P0C7W6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC172P0C7W6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms