Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCATP04180 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCATP04180 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LCATP04180 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.65□□□□□ -0.06
LCATP04180 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.65□□□□□ -0.06
LCATP04180 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCATP04180 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.65□□□□□ -0.06
LCATP04180 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 AP002414.3-201ENST00000589352 1468 ntBASIC14.64□□□□□ -0.07
LCATP04180 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.64□□□□□ -0.07
LCATP04180 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.64□□□□□ -0.07
LCATP04180 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.64□□□□□ -0.07
LCATP04180 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 SLC25A6P2-201ENST00000497974 877 ntBASIC14.64□□□□□ -0.07
LCATP04180 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.64□□□□□ -0.07
LCATP04180 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.64□□□□□ -0.07
LCATP04180 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LCATP04180 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.64□□□□□ -0.07
LCATP04180 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
LCATP04180 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.64□□□□□ -0.07
LCATP04180 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCATP04180 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
LCATP04180 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.63□□□□□ -0.07
LCATP04180 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.63□□□□□ -0.07
LCATP04180 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.63□□□□□ -0.07
LCATP04180 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.63□□□□□ -0.07
LCATP04180 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.63□□□□□ -0.07
LCATP04180 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 AC012640.2-201ENST00000561606 901 ntBASIC14.63□□□□□ -0.07
LCATP04180 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.63□□□□□ -0.07
LCATP04180 AC013467.2-201ENST00000605472 835 ntBASIC14.63□□□□□ -0.07
LCATP04180 AC008667.4-201ENST00000607370 168 ntBASIC14.63□□□□□ -0.07
LCATP04180 AL773604.1-201ENST00000617417 272 ntBASIC14.63□□□□□ -0.07
LCATP04180 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
LCATP04180 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.63□□□□□ -0.07
LCATP04180 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCATP04180 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms