Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COL1A1P02452 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 UBALD1-205ENST00000590891 2641 ntBASIC19.87■□□□□ 0.77
COL1A1P02452 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
COL1A1P02452 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
COL1A1P02452 AL589702.1-201ENST00000641229 1509 ntBASIC19.87■□□□□ 0.77
COL1A1P02452 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL1A1P02452 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
COL1A1P02452 AL359881.2-201ENST00000602973 570 ntBASIC19.86■□□□□ 0.77
COL1A1P02452 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.86■□□□□ 0.77
COL1A1P02452 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.86■□□□□ 0.77
COL1A1P02452 MIR6752-201ENST00000618442 71 ntBASIC19.86■□□□□ 0.77
COL1A1P02452 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COL1A1P02452 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COL1A1P02452 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
COL1A1P02452 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.86■□□□□ 0.77
COL1A1P02452 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
COL1A1P02452 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A1P02452 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.86■□□□□ 0.77
COL1A1P02452 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A1P02452 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A1P02452 AC008738.7-201ENST00000609744 511 ntBASIC19.86■□□□□ 0.77
COL1A1P02452 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A1P02452 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL1A1P02452 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.85■□□□□ 0.77
COL1A1P02452 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.85■□□□□ 0.77
COL1A1P02452 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A1P02452 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
COL1A1P02452 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.85■□□□□ 0.77
COL1A1P02452 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A1P02452 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.85■□□□□ 0.77
COL1A1P02452 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL1A1P02452 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A1P02452 MTND6P24-201ENST00000440466 518 ntBASIC19.85■□□□□ 0.77
COL1A1P02452 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A1P02452 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.85■□□□□ 0.77
COL1A1P02452 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A1P02452 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.85■□□□□ 0.77
COL1A1P02452 RN7SL828P-201ENST00000607615 303 ntBASIC19.85■□□□□ 0.77
COL1A1P02452 AC020765.3-201ENST00000613051 740 ntBASIC19.85■□□□□ 0.77
COL1A1P02452 AL035456.1-201ENST00000456064 1369 ntBASIC19.85■□□□□ 0.77
COL1A1P02452 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms