Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDGFBP01127 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDGFBP01127 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDGFBP01127 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PDGFBP01127 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFBP01127 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFBP01127 AL355312.1-201ENST00000407115 2176 ntBASIC16.57■□□□□ 0.24
PDGFBP01127 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFBP01127 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDGFBP01127 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFBP01127 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PDGFBP01127 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFBP01127 FRMD8P1-201ENST00000440433 1524 ntBASIC16.56■□□□□ 0.24
PDGFBP01127 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFBP01127 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFBP01127 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFBP01127 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFBP01127 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFBP01127 FO681548.1-201ENST00000455617 1132 ntBASIC16.56■□□□□ 0.24
PDGFBP01127 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFBP01127 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.56■□□□□ 0.24
PDGFBP01127 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.56■□□□□ 0.24
PDGFBP01127 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFBP01127 RARRES2P5-201ENST00000564013 466 ntBASIC16.56■□□□□ 0.24
PDGFBP01127 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFBP01127 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFBP01127 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFBP01127 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFBP01127 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFBP01127 HCG11-201ENST00000411553 5696 ntBASIC16.56■□□□□ 0.24
PDGFBP01127 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFBP01127 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDGFBP01127 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFBP01127 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.55■□□□□ 0.24
PDGFBP01127 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDGFBP01127 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFBP01127 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFBP01127 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFBP01127 TDH-203ENST00000531764 1110 ntBASIC16.55■□□□□ 0.24
PDGFBP01127 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFBP01127 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFBP01127 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFBP01127 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFBP01127 AC020765.3-201ENST00000613051 740 ntBASIC16.55■□□□□ 0.24
PDGFBP01127 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
PDGFBP01127 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFBP01127 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFBP01127 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PDGFBP01127 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFBP01127 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFBP01127 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDGFBP01127 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFBP01127 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDGFBP01127 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PDGFBP01127 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PDGFBP01127 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDGFBP01127 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.54■□□□□ 0.24
PDGFBP01127 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDGFBP01127 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFBP01127 RPL7P3-201ENST00000441388 714 ntBASIC16.54■□□□□ 0.24
PDGFBP01127 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFBP01127 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.54■□□□□ 0.24
PDGFBP01127 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.54■□□□□ 0.24
PDGFBP01127 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFBP01127 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.54■□□□□ 0.24
PDGFBP01127 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.54■□□□□ 0.24
PDGFBP01127 AL022328.1-201ENST00000610050 478 ntBASIC16.54■□□□□ 0.24
PDGFBP01127 AC009542.2-202ENST00000619004 1067 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms