Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 HAUS4P1-201ENST00000406739 1145 ntBASIC17.81■□□□□ 0.44
TIMP1P01033 BCYRN1-201ENST00000418539 200 ntBASIC17.81■□□□□ 0.44
TIMP1P01033 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.81■□□□□ 0.44
TIMP1P01033 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.81■□□□□ 0.44
TIMP1P01033 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.81■□□□□ 0.44
TIMP1P01033 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.81■□□□□ 0.44
TIMP1P01033 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.81■□□□□ 0.44
TIMP1P01033 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.81■□□□□ 0.44
TIMP1P01033 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TIMP1P01033 RPSAP52-203ENST00000622976 1023 ntBASIC17.81■□□□□ 0.44
TIMP1P01033 AC068587.10-201ENST00000641210 219 ntBASIC17.81■□□□□ 0.44
TIMP1P01033 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TIMP1P01033 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 BCL2-203ENST00000589955 5011 ntBASIC17.81■□□□□ 0.44
TIMP1P01033 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TIMP1P01033 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.8■□□□□ 0.44
TIMP1P01033 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TIMP1P01033 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.8■□□□□ 0.44
TIMP1P01033 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
TIMP1P01033 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TIMP1P01033 AC093525.8-201ENST00000624099 1342 ntBASIC17.8■□□□□ 0.44
TIMP1P01033 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TIMP1P01033 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 KLF2P4-201ENST00000451959 1225 ntBASIC17.8■□□□□ 0.44
TIMP1P01033 CTBP2P5-201ENST00000454986 1264 ntBASIC17.8■□□□□ 0.44
TIMP1P01033 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.8■□□□□ 0.44
TIMP1P01033 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TIMP1P01033 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.8■□□□□ 0.44
TIMP1P01033 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.8■□□□□ 0.44
TIMP1P01033 SLC25A47P1-201ENST00000531577 414 ntBASIC17.8■□□□□ 0.44
TIMP1P01033 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TIMP1P01033 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.8■□□□□ 0.44
TIMP1P01033 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.8■□□□□ 0.44
TIMP1P01033 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
TIMP1P01033 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TIMP1P01033 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.8■□□□□ 0.44
TIMP1P01033 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.8■□□□□ 0.44
TIMP1P01033 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP1P01033 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TIMP1P01033 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP1P01033 PDIA3P1-201ENST00000471856 1510 ntBASIC17.79■□□□□ 0.44
TIMP1P01033 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP1P01033 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.79■□□□□ 0.44
TIMP1P01033 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.79■□□□□ 0.44
TIMP1P01033 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.79■□□□□ 0.44
TIMP1P01033 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.79■□□□□ 0.44
TIMP1P01033 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.79■□□□□ 0.44
TIMP1P01033 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.79■□□□□ 0.44
TIMP1P01033 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.79■□□□□ 0.44
TIMP1P01033 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TIMP1P01033 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP1P01033 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.79■□□□□ 0.44
TIMP1P01033 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.79■□□□□ 0.44
TIMP1P01033 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP1P01033 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP1P01033 AL138688.1-201ENST00000624851 1594 ntBASIC17.79■□□□□ 0.44
TIMP1P01033 AC020907.1-201ENST00000616460 1350 ntBASIC17.79■□□□□ 0.44
TIMP1P01033 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TIMP1P01033 LINC02012-201ENST00000608206 1725 ntBASIC17.78■□□□□ 0.44
TIMP1P01033 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms