Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 RNF126P1-202ENST00000569893 925 ntBASIC11.48□□□□□ -0.57
NDUFA1O15239 AC011840.4-201ENST00000578471 627 ntBASIC11.48□□□□□ -0.57
NDUFA1O15239 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 AC090616.6-201ENST00000582640 721 ntBASIC11.48□□□□□ -0.57
NDUFA1O15239 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
NDUFA1O15239 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
NDUFA1O15239 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA1O15239 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 AC022532.1-201ENST00000624563 1728 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 FAM220CP-201ENST00000395253 831 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 TSPY22P-201ENST00000427496 604 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 AL671277.2-201ENST00000458060 996 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.47□□□□□ -0.57
NDUFA1O15239 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 AC019129.2-201ENST00000609837 1235 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 IGHV3-41-201ENST00000613121 348 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 AC006011.2-201ENST00000621313 1158 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 AC124864.1-201ENST00000623408 392 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 AC144831.1-201ENST00000573312 2656 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
NDUFA1O15239 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms