Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 AKAP8P1-201ENST00000434743 1349 ntBASIC18.75■□□□□ 0.59
DDX39AO00148 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DDX39AO00148 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 CROCCP1-201ENST00000426910 5675 ntBASIC18.75■□□□□ 0.59
DDX39AO00148 UXT-AS1-201ENST00000590504 1525 ntBASIC18.75■□□□□ 0.59
DDX39AO00148 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX39AO00148 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX39AO00148 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX39AO00148 MIR3909-201ENST00000579518 119 ntBASIC18.75■□□□□ 0.59
DDX39AO00148 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX39AO00148 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX39AO00148 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX39AO00148 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX39AO00148 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 UBALD1-205ENST00000590891 2641 ntBASIC18.74■□□□□ 0.59
DDX39AO00148 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
DDX39AO00148 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX39AO00148 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
DDX39AO00148 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX39AO00148 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX39AO00148 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX39AO00148 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.74■□□□□ 0.59
DDX39AO00148 IGHV3-62-201ENST00000520057 340 ntBASIC18.74■□□□□ 0.59
DDX39AO00148 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX39AO00148 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
DDX39AO00148 AC027796.2-201ENST00000575326 344 ntBASIC18.74■□□□□ 0.59
DDX39AO00148 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.74■□□□□ 0.59
DDX39AO00148 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
DDX39AO00148 AC021097.1-201ENST00000607902 574 ntBASIC18.74■□□□□ 0.59
DDX39AO00148 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX39AO00148 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
DDX39AO00148 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
DDX39AO00148 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.74■□□□□ 0.59
DDX39AO00148 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX39AO00148 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DDX39AO00148 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 LTB4R2-202ENST00000528054 3092 ntBASIC18.73■□□□□ 0.59
DDX39AO00148 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.73■□□□□ 0.59
DDX39AO00148 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 AC079328.2-201ENST00000561241 3354 ntBASIC18.73■□□□□ 0.59
DDX39AO00148 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.73■□□□□ 0.59
DDX39AO00148 KRT18P32-201ENST00000424695 1287 ntBASIC18.73■□□□□ 0.59
DDX39AO00148 FAM58DP-201ENST00000428076 619 ntBASIC18.73■□□□□ 0.59
DDX39AO00148 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.73■□□□□ 0.59
DDX39AO00148 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.73■□□□□ 0.59
DDX39AO00148 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.73■□□□□ 0.59
DDX39AO00148 AL138918.1-201ENST00000568306 659 ntBASIC18.73■□□□□ 0.59
DDX39AO00148 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.73■□□□□ 0.59
DDX39AO00148 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
DDX39AO00148 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
DDX39AO00148 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
DDX39AO00148 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
DDX39AO00148 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 KRT8P39-201ENST00000396270 1433 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms