Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 FAM210CP-201ENST00000445714 574 ntBASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AL139288.1-201ENST00000623748 933 ntBASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AL358472.4-201ENST00000633140 710 ntBASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LINC00959A0A1B0GUT2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AL139384.1-201ENST00000612143 3047 ntBASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 GGT3P-204ENST00000453783 1664 ntBASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AC106795.1-205ENST00000512851 1056 ntBASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 NKAPP1-205ENST00000585790 367 ntBASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AL139424.1-201ENST00000607572 797 ntBASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AC091076.1-201ENST00000610741 619 ntBASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AL589182.2-201ENST00000619332 1049 ntBASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 NORAD-201ENST00000565493 5339 ntBASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00959A0A1B0GUT2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms