Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DRB4X5D2U9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DRB4X5D2U9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DRB4X5D2U9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HLA-DRB4X5D2U9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRB4X5D2U9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRB4X5D2U9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRB4X5D2U9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DRB4X5D2U9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRB4X5D2U9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DRB4X5D2U9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DRB4X5D2U9 RARRES2P2-201ENST00000394842 485 ntBASIC17.86■□□□□ 0.45
HLA-DRB4X5D2U9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DRB4X5D2U9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DRB4X5D2U9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DRB4X5D2U9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DRB4X5D2U9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DRB4X5D2U9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DRB4X5D2U9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.84■□□□□ 0.45
HLA-DRB4X5D2U9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DRB4X5D2U9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
HLA-DRB4X5D2U9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DRB4X5D2U9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DRB4X5D2U9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DRB4X5D2U9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.84■□□□□ 0.45
HLA-DRB4X5D2U9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DRB4X5D2U9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DRB4X5D2U9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DRB4X5D2U9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRB4X5D2U9 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DRB4X5D2U9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRB4X5D2U9 AC026202.3-201ENST00000600805 1127 ntBASIC17.83■□□□□ 0.44
HLA-DRB4X5D2U9 RAP2CP1-202ENST00000605179 643 ntBASIC17.83■□□□□ 0.44
HLA-DRB4X5D2U9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRB4X5D2U9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRB4X5D2U9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DRB4X5D2U9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRB4X5D2U9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DRB4X5D2U9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DRB4X5D2U9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRB4X5D2U9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRB4X5D2U9 AC096887.2-201ENST00000623443 1957 ntBASIC17.82■□□□□ 0.44
HLA-DRB4X5D2U9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DRB4X5D2U9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRB4X5D2U9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRB4X5D2U9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DRB4X5D2U9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRB4X5D2U9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRB4X5D2U9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HLA-DRB4X5D2U9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HLA-DRB4X5D2U9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DRB4X5D2U9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRB4X5D2U9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRB4X5D2U9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRB4X5D2U9 AC009831.1-201ENST00000580420 1582 ntBASIC17.79■□□□□ 0.44
HLA-DRB4X5D2U9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DRB4X5D2U9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB4X5D2U9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB4X5D2U9 AC133552.2-201ENST00000619106 1032 ntBASIC17.78■□□□□ 0.44
HLA-DRB4X5D2U9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DRB4X5D2U9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB4X5D2U9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB4X5D2U9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DRB4X5D2U9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB4X5D2U9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DRB4X5D2U9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRB4X5D2U9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB4X5D2U9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB4X5D2U9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DRB4X5D2U9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DRB4X5D2U9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB4X5D2U9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB4X5D2U9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB4X5D2U9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB4X5D2U9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms