Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB1Q9Y5G3 CLDN5-201ENST00000403084 2357 ntBASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB1Q9Y5G3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 DUSP8P5-201ENST00000422884 1815 ntBASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 ZNRF2P2-203ENST00000454624 420 ntBASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB1Q9Y5G3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB1Q9Y5G3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGB1Q9Y5G3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGB1Q9Y5G3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHGB1Q9Y5G3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGB1Q9Y5G3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGB1Q9Y5G3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB1Q9Y5G3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGB1Q9Y5G3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB1Q9Y5G3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGB1Q9Y5G3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB1Q9Y5G3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGB1Q9Y5G3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGB1Q9Y5G3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB1Q9Y5G3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB1Q9Y5G3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB1Q9Y5G3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGB1Q9Y5G3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB1Q9Y5G3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB1Q9Y5G3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB1Q9Y5G3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB1Q9Y5G3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB1Q9Y5G3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB1Q9Y5G3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB1Q9Y5G3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHGB1Q9Y5G3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB1Q9Y5G3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHGB1Q9Y5G3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.7■■□□□ 1.07
PCDHGB1Q9Y5G3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB1Q9Y5G3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB1Q9Y5G3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB1Q9Y5G3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB1Q9Y5G3 AC141586.4-201ENST00000624558 1573 ntBASIC21.7■■□□□ 1.06
PCDHGB1Q9Y5G3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGB1Q9Y5G3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB1Q9Y5G3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB1Q9Y5G3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB1Q9Y5G3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB1Q9Y5G3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGB1Q9Y5G3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB1Q9Y5G3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB1Q9Y5G3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
PCDHGB1Q9Y5G3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB1Q9Y5G3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB1Q9Y5G3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGB1Q9Y5G3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms