Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGC4Q9Y5F7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHGC4Q9Y5F7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGC4Q9Y5F7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHGC4Q9Y5F7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
PCDHGC4Q9Y5F7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGC4Q9Y5F7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PCDHGC4Q9Y5F7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC4Q9Y5F7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PCDHGC4Q9Y5F7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC4Q9Y5F7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC4Q9Y5F7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC4Q9Y5F7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC4Q9Y5F7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC4Q9Y5F7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC4Q9Y5F7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGC4Q9Y5F7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHGC4Q9Y5F7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGC4Q9Y5F7 RPS2P7-201ENST00000447334 885 ntBASIC24.15■■□□□ 1.46
PCDHGC4Q9Y5F7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHGC4Q9Y5F7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGC4Q9Y5F7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGC4Q9Y5F7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.45
PCDHGC4Q9Y5F7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGC4Q9Y5F7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGC4Q9Y5F7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHGC4Q9Y5F7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGC4Q9Y5F7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PCDHGC4Q9Y5F7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGC4Q9Y5F7 KRT18P10-201ENST00000388836 1287 ntBASIC24.13■■□□□ 1.45
PCDHGC4Q9Y5F7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
PCDHGC4Q9Y5F7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHGC4Q9Y5F7 AC087393.1-201ENST00000582896 145 ntBASIC24.12■■□□□ 1.45
PCDHGC4Q9Y5F7 BHLHE23-202ENST00000612929 1109 ntBASIC24.12■■□□□ 1.45
PCDHGC4Q9Y5F7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGC4Q9Y5F7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 AC139795.1-202ENST00000500444 432 ntBASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC4Q9Y5F7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDHGC4Q9Y5F7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC4Q9Y5F7 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGC4Q9Y5F7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGC4Q9Y5F7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGC4Q9Y5F7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
PCDHGC4Q9Y5F7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 AC097639.1-201ENST00000565519 1891 ntBASIC24.09■■□□□ 1.45
PCDHGC4Q9Y5F7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC4Q9Y5F7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
PCDHGC4Q9Y5F7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC4Q9Y5F7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.08■■□□□ 1.45
PCDHGC4Q9Y5F7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHGC4Q9Y5F7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC4Q9Y5F7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC4Q9Y5F7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.08■■□□□ 1.44
PCDHGC4Q9Y5F7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHGC4Q9Y5F7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC4Q9Y5F7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC4Q9Y5F7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC4Q9Y5F7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHGC4Q9Y5F7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC4Q9Y5F7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 AC010980.1-201ENST00000587192 1142 ntBASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC4Q9Y5F7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
PCDHGC4Q9Y5F7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC4Q9Y5F7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHGC4Q9Y5F7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC4Q9Y5F7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.04■■□□□ 1.44
PCDHGC4Q9Y5F7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC4Q9Y5F7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC4Q9Y5F7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms