Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
PCDHB1Q9Y5F3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PCDHB1Q9Y5F3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB1Q9Y5F3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB1Q9Y5F3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB1Q9Y5F3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
PCDHB1Q9Y5F3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB1Q9Y5F3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB1Q9Y5F3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHB1Q9Y5F3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PCDHB1Q9Y5F3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB1Q9Y5F3 RAP2CP1-202ENST00000605179 643 ntBASIC23.88■■□□□ 1.41
PCDHB1Q9Y5F3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB1Q9Y5F3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHB1Q9Y5F3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PCDHB1Q9Y5F3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB1Q9Y5F3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB1Q9Y5F3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
PCDHB1Q9Y5F3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB1Q9Y5F3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB1Q9Y5F3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB1Q9Y5F3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB1Q9Y5F3 AL592295.1-201ENST00000400984 884 ntBASIC23.85■■□□□ 1.41
PCDHB1Q9Y5F3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PCDHB1Q9Y5F3 AC096887.2-201ENST00000623443 1957 ntBASIC23.84■■□□□ 1.41
PCDHB1Q9Y5F3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB1Q9Y5F3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB1Q9Y5F3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.84■■□□□ 1.41
PCDHB1Q9Y5F3 AC009299.2-201ENST00000482477 511 ntBASIC23.84■■□□□ 1.41
PCDHB1Q9Y5F3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB1Q9Y5F3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB1Q9Y5F3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 AC139795.1-202ENST00000500444 432 ntBASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHB1Q9Y5F3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.83■■□□□ 1.4
PCDHB1Q9Y5F3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 AC074183.2-201ENST00000623112 922 ntBASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB1Q9Y5F3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 MIR6765-201ENST00000614092 87 ntBASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB1Q9Y5F3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 AC103834.1-201ENST00000520383 144 ntBASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHB1Q9Y5F3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB1Q9Y5F3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB1Q9Y5F3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB1Q9Y5F3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PCDHB1Q9Y5F3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB1Q9Y5F3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHB1Q9Y5F3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB1Q9Y5F3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB1Q9Y5F3 YBX1P4-201ENST00000392794 808 ntBASIC23.78■■□□□ 1.4
PCDHB1Q9Y5F3 PVT1_1.1-201ENST00000615125 194 ntBASIC23.78■■□□□ 1.4
PCDHB1Q9Y5F3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB1Q9Y5F3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms