Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 LINC00969-324ENST00000630243 955 ntTSL 57.56□□□□□ -1.23e-8■□□□□ 11.1
WDR3Q9UNX4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.821e-6■□□□□ 10.9
WDR3Q9UNX4 MYC-204ENST00000520751 577 ntTSL 320.03■□□□□ 0.81e-6■□□□□ 10.9
WDR3Q9UNX4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.92■□□□□ 0.781e-6■□□□□ 10.9
WDR3Q9UNX4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.711e-6■□□□□ 10.9
WDR3Q9UNX4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.51e-6■□□□□ 10.9
WDR3Q9UNX4 MYC-203ENST00000517291 1023 ntTSL 1 (best)15.03■□□□□ -01e-6■□□□□ 10.9
WDR3Q9UNX4 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.321e-6■□□□□ 10.9
WDR3Q9UNX4 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.221e-323■□□□□ 10.8
WDR3Q9UNX4 SCARNA7-201ENST00000458797 330 ntBASIC10.77□□□□□ -0.691e-323■□□□□ 10.8
WDR3Q9UNX4 KPNA4-203ENST00000483437 510 ntTSL 55.91□□□□□ -1.461e-323■□□□□ 10.8
WDR3Q9UNX4 FAM178B-205ENST00000494172 592 ntTSL 318.99■□□□□ 0.633e-6■□□□□ 10.7
WDR3Q9UNX4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.53e-6■□□□□ 10.7
WDR3Q9UNX4 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.223e-6■□□□□ 10.7
WDR3Q9UNX4 FAM178B-202ENST00000470789 722 ntTSL 1 (best)11.96□□□□□ -0.493e-6■□□□□ 10.7
WDR3Q9UNX4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.94e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.55■■□□□ 1.844e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.654e-7■□□□□ 10.5
WDR3Q9UNX4 RANBP1-213ENST00000486575 2177 ntTSL 222.39■■□□□ 1.174e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-210ENST00000484471 2746 ntTSL 521.71■■□□□ 1.074e-7■□□□□ 10.5
WDR3Q9UNX4 RANBP1-210ENST00000435265 1879 ntTSL 220.77■□□□□ 0.924e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.06■□□□□ 0.84e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.74e-7■□□□□ 10.5
WDR3Q9UNX4 RANBP1-207ENST00000423859 832 ntTSL 319.32■□□□□ 0.684e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.594e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-208ENST00000464941 3361 ntTSL 217.46■□□□□ 0.394e-7■□□□□ 10.5
WDR3Q9UNX4 RANBP1-205ENST00000418705 932 ntTSL 317.36■□□□□ 0.374e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-205ENST00000435930 3328 ntTSL 216.6■□□□□ 0.254e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-209ENST00000466096 3949 ntTSL 1 (best)15.96■□□□□ 0.154e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.114e-7■□□□□ 10.5
WDR3Q9UNX4 RANBP1-203ENST00000411892 584 ntTSL 215.67■□□□□ 0.14e-7■□□□□ 10.5
WDR3Q9UNX4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.5■□□□□ 0.074e-7■□□□□ 10.5
WDR3Q9UNX4 RANBP1-211ENST00000448394 688 ntTSL 215.3■□□□□ 0.044e-7■□□□□ 10.5
WDR3Q9UNX4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.014e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-203ENST00000519369 824 ntTSL 214.07□□□□□ -0.164e-7■□□□□ 10.5
WDR3Q9UNX4 RABL6-207ENST00000461992 763 ntTSL 1 (best)13.47□□□□□ -0.254e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.264e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-209ENST00000521289 737 ntTSL 511.5□□□□□ -0.574e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-212ENST00000618656 627 ntTSL 3 BASIC9.99□□□□□ -0.814e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-207ENST00000520627 423 ntTSL 5 BASIC9.79□□□□□ -0.844e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.984e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-204ENST00000519606 424 ntTSL 3 BASIC8.9□□□□□ -0.984e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-206ENST00000520490 402 ntTSL 38.54□□□□□ -1.044e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.06□□□□□ -1.124e-7■□□□□ 10.5
WDR3Q9UNX4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.56□□□□□ -1.24e-7■□□□□ 10.5
WDR3Q9UNX4 SNORD54-201ENST00000459159 67 ntBASIC-2.35□□□□□ -2.794e-7■□□□□ 10.5
WDR3Q9UNX4 OAZ1-203ENST00000586054 2832 nt23.92■■□□□ 1.429e-8■□□□□ 10.2
WDR3Q9UNX4 OAZ1-204ENST00000588673 780 ntTSL 321.58■■□□□ 1.059e-8■□□□□ 10.2
WDR3Q9UNX4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.829e-8■□□□□ 10.2
WDR3Q9UNX4 OAZ1-210ENST00000593012 1357 ntTSL 219.43■□□□□ 0.79e-8■□□□□ 10.2
WDR3Q9UNX4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.619e-8■□□□□ 10.2
WDR3Q9UNX4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.479e-8■□□□□ 10.2
WDR3Q9UNX4 OAZ1-201ENST00000581150 1131 ntTSL 517.74■□□□□ 0.439e-8■□□□□ 10.2
WDR3Q9UNX4 OAZ1-209ENST00000592787 857 ntTSL 217.15■□□□□ 0.349e-8■□□□□ 10.2
WDR3Q9UNX4 OAZ1-207ENST00000590943 1012 ntTSL 217.03■□□□□ 0.329e-8■□□□□ 10.2
WDR3Q9UNX4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.26■□□□□ 0.832e-6■□□□□ 10
WDR3Q9UNX4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.94■□□□□ 0.782e-6■□□□□ 10
WDR3Q9UNX4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.39■□□□□ 0.532e-6■□□□□ 10
WDR3Q9UNX4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.56□□□□□ -0.082e-6■□□□□ 10
WDR3Q9UNX4 RTN4-211ENST00000438462 656 ntTSL 512.43□□□□□ -0.422e-6■□□□□ 10
WDR3Q9UNX4 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.93□□□□□ -0.822e-6■□□□□ 10
WDR3Q9UNX4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.27□□□□□ -1.252e-6■□□□□ 10
WDR3Q9UNX4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.05□□□□□ -1.762e-6■□□□□ 10
WDR3Q9UNX4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.93□□□□□ -1.782e-6■□□□□ 10
WDR3Q9UNX4 SCARNA9-201ENST00000530422 353 ntBASIC10.65□□□□□ -0.71e-323■□□□□ 10
WDR3Q9UNX4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.51e-323■□□□□ 10
WDR3Q9UNX4 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 44.66□□□□□ -1.661e-323■□□□□ 10
WDR3Q9UNX4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.671e-323■□□□□ 10
WDR3Q9UNX4 RRP1-202ENST00000471909 2544 ntTSL 1 (best)18.28■□□□□ 0.526e-6■□□□□ 9.9
WDR3Q9UNX4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.256e-6■□□□□ 9.9
WDR3Q9UNX4 RRP1-201ENST00000467112 3019 ntTSL 1 (best)15.75■□□□□ 0.116e-6■□□□□ 9.9
WDR3Q9UNX4 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.25□□□□□ -0.136e-6■□□□□ 9.9
WDR3Q9UNX4 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.55□□□□□ -0.246e-6■□□□□ 9.9
WDR3Q9UNX4 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.486e-6■□□□□ 9.9
WDR3Q9UNX4 BCCIP-204ENST00000463330 500 ntTSL 34.97□□□□□ -1.616e-6■□□□□ 9.9
WDR3Q9UNX4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.77□□□□□ -1.971e-323■□□□□ 9.8
WDR3Q9UNX4 SCARNA2-201ENST00000458748 420 ntBASIC18.39■□□□□ 0.531e-323■□□□□ 9.7
WDR3Q9UNX4 AL356488.2-201ENST00000602755 427 ntBASIC18.16■□□□□ 0.51e-323■□□□□ 9.7
WDR3Q9UNX4 LDB1-204ENST00000490751 762 ntTSL 232.89■■■□□ 2.862e-11■□□□□ 9.7
WDR3Q9UNX4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.11■■■□□ 2.092e-11■□□□□ 9.7
WDR3Q9UNX4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.42e-11■□□□□ 9.7
WDR3Q9UNX4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.68■■□□□ 1.062e-6■□□□□ 9.7
WDR3Q9UNX4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.752e-6■□□□□ 9.7
WDR3Q9UNX4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.432e-6■□□□□ 9.7
WDR3Q9UNX4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.422e-6■□□□□ 9.7
WDR3Q9UNX4 FASN-210ENST00000636968 100 ntTSL 517.66■□□□□ 0.422e-6■□□□□ 9.7
WDR3Q9UNX4 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC14.12□□□□□ -0.152e-6■□□□□ 9.7
WDR3Q9UNX4 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.74□□□□□ -0.212e-6■□□□□ 9.7
WDR3Q9UNX4 HIRA-203ENST00000452818 453 ntTSL 511.63□□□□□ -0.552e-6■□□□□ 9.7
WDR3Q9UNX4 FASN-211ENST00000637026 100 ntTSL 510.97□□□□□ -0.652e-6■□□□□ 9.7
WDR3Q9UNX4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.426e-37■□□□□ 9.6
WDR3Q9UNX4 GPI-208ENST00000588991 2021 ntTSL 221.76■■□□□ 1.076e-37■□□□□ 9.6
WDR3Q9UNX4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.14■□□□□ 0.176e-37■□□□□ 9.6
WDR3Q9UNX4 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.31□□□□□ -1.086e-37■□□□□ 9.6
WDR3Q9UNX4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.982e-7■□□□□ 9.2
WDR3Q9UNX4 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)20.23■□□□□ 0.832e-7■□□□□ 9.2
WDR3Q9UNX4 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 319.6■□□□□ 0.732e-7■□□□□ 9.2
WDR3Q9UNX4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.65e-11■□□□□ 9.2
WDR3Q9UNX4 GMPR-203ENST00000543191 675 ntTSL 210.81□□□□□ -0.685e-11■□□□□ 9.2
WDR3Q9UNX4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.89■■□□□ 1.091e-9■□□□□ 8.8
Retrieved 100 of 1,750 protein–RNA pairs in 21.6 ms