Protein–RNA interactions for Protein: Q9UK80

USP21, Ubiquitin carboxyl-terminal hydrolase 21, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP21Q9UK80 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC32.41■■■□□ 2.78
USP21Q9UK80 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
USP21Q9UK80 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
USP21Q9UK80 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
USP21Q9UK80 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
USP21Q9UK80 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC32.4■■■□□ 2.78
USP21Q9UK80 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC32.4■■■□□ 2.78
USP21Q9UK80 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC32.4■■■□□ 2.78
USP21Q9UK80 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
USP21Q9UK80 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC32.4■■■□□ 2.78
USP21Q9UK80 ABCB10P3-201ENST00000561950 2166 ntBASIC32.4■■■□□ 2.78
USP21Q9UK80 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
USP21Q9UK80 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
USP21Q9UK80 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
USP21Q9UK80 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
USP21Q9UK80 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
USP21Q9UK80 ST7-AS1-201ENST00000456775 1889 ntBASIC32.4■■■□□ 2.78
USP21Q9UK80 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
USP21Q9UK80 MIR6821-201ENST00000617625 74 ntBASIC32.39■■■□□ 2.78
USP21Q9UK80 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
USP21Q9UK80 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
USP21Q9UK80 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.38■■■□□ 2.77
USP21Q9UK80 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC32.38■■■□□ 2.77
USP21Q9UK80 GLI3-203ENST00000437480 451 ntTSL 2 BASIC32.38■■■□□ 2.77
USP21Q9UK80 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
USP21Q9UK80 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
USP21Q9UK80 AL136162.1-201ENST00000607711 1078 ntBASIC32.38■■■□□ 2.77
USP21Q9UK80 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC32.38■■■□□ 2.77
USP21Q9UK80 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
USP21Q9UK80 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC32.37■■■□□ 2.77
USP21Q9UK80 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
USP21Q9UK80 AC105265.2-201ENST00000467189 838 ntBASIC32.37■■■□□ 2.77
USP21Q9UK80 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.37■■■□□ 2.77
USP21Q9UK80 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
USP21Q9UK80 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
USP21Q9UK80 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
USP21Q9UK80 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
USP21Q9UK80 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
USP21Q9UK80 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC32.36■■■□□ 2.77
USP21Q9UK80 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC32.35■■■□□ 2.77
USP21Q9UK80 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC32.35■■■□□ 2.77
USP21Q9UK80 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
USP21Q9UK80 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC32.35■■■□□ 2.77
USP21Q9UK80 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
USP21Q9UK80 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
USP21Q9UK80 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
USP21Q9UK80 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
USP21Q9UK80 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
USP21Q9UK80 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
USP21Q9UK80 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
USP21Q9UK80 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
USP21Q9UK80 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.77
USP21Q9UK80 AL162430.1-201ENST00000480705 870 ntBASIC32.32■■■□□ 2.76
USP21Q9UK80 AL355001.2-201ENST00000620617 1191 ntBASIC32.32■■■□□ 2.76
USP21Q9UK80 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
USP21Q9UK80 EDA-201ENST00000338901 1233 ntBASIC32.31■■■□□ 2.76
USP21Q9UK80 CD72-202ENST00000378430 585 ntTSL 3 BASIC32.31■■■□□ 2.76
USP21Q9UK80 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32.31■■■□□ 2.76
USP21Q9UK80 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
USP21Q9UK80 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
USP21Q9UK80 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC32.3■■■□□ 2.76
USP21Q9UK80 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
USP21Q9UK80 AC097381.1-201ENST00000429019 1296 ntBASIC32.3■■■□□ 2.76
USP21Q9UK80 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.3■■■□□ 2.76
USP21Q9UK80 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
USP21Q9UK80 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
USP21Q9UK80 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
USP21Q9UK80 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
USP21Q9UK80 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
USP21Q9UK80 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
USP21Q9UK80 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC32.29■■■□□ 2.76
USP21Q9UK80 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC32.29■■■□□ 2.76
USP21Q9UK80 CLTA-210ENST00000540080 989 ntTSL 2 BASIC32.29■■■□□ 2.76
USP21Q9UK80 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
USP21Q9UK80 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.28■■■□□ 2.76
USP21Q9UK80 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
USP21Q9UK80 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC32.28■■■□□ 2.76
USP21Q9UK80 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC32.28■■■□□ 2.76
USP21Q9UK80 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
USP21Q9UK80 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
USP21Q9UK80 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
USP21Q9UK80 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
USP21Q9UK80 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
USP21Q9UK80 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
USP21Q9UK80 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
USP21Q9UK80 AC087623.3-201ENST00000607047 1098 ntBASIC32.26■■■□□ 2.75
USP21Q9UK80 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC32.26■■■□□ 2.75
USP21Q9UK80 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
USP21Q9UK80 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC32.25■■■□□ 2.75
USP21Q9UK80 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.25■■■□□ 2.75
USP21Q9UK80 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
USP21Q9UK80 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
USP21Q9UK80 AC024257.2-201ENST00000549699 147 ntBASIC32.24■■■□□ 2.75
USP21Q9UK80 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.24■■■□□ 2.75
USP21Q9UK80 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
USP21Q9UK80 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
USP21Q9UK80 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
USP21Q9UK80 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC32.22■■■□□ 2.75
USP21Q9UK80 AL136967.2-201ENST00000623968 743 ntBASIC32.22■■■□□ 2.75
USP21Q9UK80 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.22■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms