Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.95■■□□□ 1.1
LRFN1Q9P244 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LRFN1Q9P244 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRFN1Q9P244 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.94■■□□□ 1.1
LRFN1Q9P244 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRFN1Q9P244 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRFN1Q9P244 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LRFN1Q9P244 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRFN1Q9P244 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRFN1Q9P244 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRFN1Q9P244 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRFN1Q9P244 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.93■■□□□ 1.1
LRFN1Q9P244 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
LRFN1Q9P244 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.93■■□□□ 1.1
LRFN1Q9P244 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LRFN1Q9P244 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.92■■□□□ 1.1
LRFN1Q9P244 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.92■■□□□ 1.1
LRFN1Q9P244 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
LRFN1Q9P244 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.9■■□□□ 1.1
LRFN1Q9P244 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
LRFN1Q9P244 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.9■■□□□ 1.1
LRFN1Q9P244 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
LRFN1Q9P244 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LRFN1Q9P244 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRFN1Q9P244 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.89■■□□□ 1.09
LRFN1Q9P244 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.88■■□□□ 1.09
LRFN1Q9P244 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.87■■□□□ 1.09
LRFN1Q9P244 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LRFN1Q9P244 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN1Q9P244 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LRFN1Q9P244 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRFN1Q9P244 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
LRFN1Q9P244 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.85■■□□□ 1.09
LRFN1Q9P244 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN1Q9P244 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LRFN1Q9P244 KRT18P24-201ENST00000344739 1156 ntBASIC21.85■■□□□ 1.09
LRFN1Q9P244 GUSBP5-201ENST00000418136 578 ntBASIC21.85■■□□□ 1.09
LRFN1Q9P244 AC239859.2-201ENST00000444165 318 ntBASIC21.85■■□□□ 1.09
LRFN1Q9P244 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN1Q9P244 THA1P-201ENST00000590384 1145 ntBASIC21.85■■□□□ 1.09
LRFN1Q9P244 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN1Q9P244 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN1Q9P244 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LRFN1Q9P244 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRFN1Q9P244 AL592295.1-201ENST00000400984 884 ntBASIC21.84■■□□□ 1.09
LRFN1Q9P244 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.84■■□□□ 1.09
LRFN1Q9P244 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.84■■□□□ 1.09
LRFN1Q9P244 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRFN1Q9P244 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.83■■□□□ 1.09
LRFN1Q9P244 Z92544.1-202ENST00000571933 1220 ntBASIC21.83■■□□□ 1.09
LRFN1Q9P244 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LRFN1Q9P244 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRFN1Q9P244 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRFN1Q9P244 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LRFN1Q9P244 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.82■■□□□ 1.08
LRFN1Q9P244 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.82■■□□□ 1.08
LRFN1Q9P244 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.82■■□□□ 1.08
LRFN1Q9P244 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN1Q9P244 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms