Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.95■■□□□ 1.1
LRFN1Q9P244 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LRFN1Q9P244 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRFN1Q9P244 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.94■■□□□ 1.1
LRFN1Q9P244 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRFN1Q9P244 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRFN1Q9P244 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRFN1Q9P244 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LRFN1Q9P244 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRFN1Q9P244 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRFN1Q9P244 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRFN1Q9P244 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRFN1Q9P244 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.93■■□□□ 1.1
LRFN1Q9P244 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
LRFN1Q9P244 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.93■■□□□ 1.1
LRFN1Q9P244 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LRFN1Q9P244 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.92■■□□□ 1.1
LRFN1Q9P244 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.92■■□□□ 1.1
LRFN1Q9P244 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN1Q9P244 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
LRFN1Q9P244 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LRFN1Q9P244 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN1Q9P244 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.9■■□□□ 1.1
LRFN1Q9P244 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
LRFN1Q9P244 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.9■■□□□ 1.1
LRFN1Q9P244 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
LRFN1Q9P244 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN1Q9P244 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LRFN1Q9P244 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRFN1Q9P244 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.89■■□□□ 1.09
LRFN1Q9P244 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.88■■□□□ 1.09
LRFN1Q9P244 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
LRFN1Q9P244 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN1Q9P244 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.87■■□□□ 1.09
LRFN1Q9P244 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LRFN1Q9P244 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN1Q9P244 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LRFN1Q9P244 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRFN1Q9P244 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
LRFN1Q9P244 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.85■■□□□ 1.09
LRFN1Q9P244 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN1Q9P244 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LRFN1Q9P244 KRT18P24-201ENST00000344739 1156 ntBASIC21.85■■□□□ 1.09
LRFN1Q9P244 GUSBP5-201ENST00000418136 578 ntBASIC21.85■■□□□ 1.09
LRFN1Q9P244 AC239859.2-201ENST00000444165 318 ntBASIC21.85■■□□□ 1.09
LRFN1Q9P244 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN1Q9P244 THA1P-201ENST00000590384 1145 ntBASIC21.85■■□□□ 1.09
LRFN1Q9P244 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN1Q9P244 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN1Q9P244 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LRFN1Q9P244 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRFN1Q9P244 AL592295.1-201ENST00000400984 884 ntBASIC21.84■■□□□ 1.09
LRFN1Q9P244 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.84■■□□□ 1.09
LRFN1Q9P244 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.84■■□□□ 1.09
LRFN1Q9P244 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRFN1Q9P244 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.83■■□□□ 1.09
LRFN1Q9P244 Z92544.1-202ENST00000571933 1220 ntBASIC21.83■■□□□ 1.09
LRFN1Q9P244 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LRFN1Q9P244 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRFN1Q9P244 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRFN1Q9P244 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LRFN1Q9P244 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.82■■□□□ 1.08
LRFN1Q9P244 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.82■■□□□ 1.08
LRFN1Q9P244 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.82■■□□□ 1.08
LRFN1Q9P244 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN1Q9P244 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms