Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS16Q9H269 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
VPS16Q9H269 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS16Q9H269 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
VPS16Q9H269 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS16Q9H269 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
VPS16Q9H269 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS16Q9H269 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VPS16Q9H269 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VPS16Q9H269 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VPS16Q9H269 SLC6A10P-202ENST00000431994 2058 ntBASIC26.17■■□□□ 1.78
VPS16Q9H269 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS16Q9H269 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.16■■□□□ 1.78
VPS16Q9H269 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS16Q9H269 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.16■■□□□ 1.78
VPS16Q9H269 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.16■■□□□ 1.78
VPS16Q9H269 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS16Q9H269 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS16Q9H269 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.15■■□□□ 1.78
VPS16Q9H269 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS16Q9H269 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
VPS16Q9H269 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
VPS16Q9H269 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS16Q9H269 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS16Q9H269 AC060814.1-201ENST00000554326 538 ntBASIC26.14■■□□□ 1.78
VPS16Q9H269 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.14■■□□□ 1.78
VPS16Q9H269 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
VPS16Q9H269 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.14■■□□□ 1.77
VPS16Q9H269 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
VPS16Q9H269 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
VPS16Q9H269 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
VPS16Q9H269 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
VPS16Q9H269 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.12■■□□□ 1.77
VPS16Q9H269 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
VPS16Q9H269 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.12■■□□□ 1.77
VPS16Q9H269 AC025884.2-201ENST00000553429 711 ntBASIC26.12■■□□□ 1.77
VPS16Q9H269 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS16Q9H269 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS16Q9H269 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
VPS16Q9H269 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS16Q9H269 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
VPS16Q9H269 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
VPS16Q9H269 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS16Q9H269 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.11■■□□□ 1.77
VPS16Q9H269 MIR7108-201ENST00000614319 87 ntBASIC26.11■■□□□ 1.77
VPS16Q9H269 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.11■■□□□ 1.77
VPS16Q9H269 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS16Q9H269 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS16Q9H269 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
VPS16Q9H269 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
VPS16Q9H269 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.1■■□□□ 1.77
VPS16Q9H269 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS16Q9H269 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
VPS16Q9H269 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.08■■□□□ 1.77
VPS16Q9H269 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.08■■□□□ 1.77
VPS16Q9H269 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
VPS16Q9H269 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
VPS16Q9H269 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
VPS16Q9H269 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS16Q9H269 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS16Q9H269 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS16Q9H269 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS16Q9H269 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
VPS16Q9H269 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS16Q9H269 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
VPS16Q9H269 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS16Q9H269 LINC01124-201ENST00000409786 2117 ntBASIC26.06■■□□□ 1.76
VPS16Q9H269 AP003733.4-201ENST00000623785 1697 ntBASIC26.06■■□□□ 1.76
VPS16Q9H269 SMPD5-203ENST00000639008 1464 ntBASIC26.06■■□□□ 1.76
VPS16Q9H269 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
VPS16Q9H269 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.06■■□□□ 1.76
VPS16Q9H269 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
VPS16Q9H269 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS16Q9H269 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS16Q9H269 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS16Q9H269 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS16Q9H269 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
VPS16Q9H269 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.05■■□□□ 1.76
VPS16Q9H269 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.05■■□□□ 1.76
VPS16Q9H269 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
VPS16Q9H269 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.05■■□□□ 1.76
VPS16Q9H269 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
VPS16Q9H269 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
VPS16Q9H269 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.05■■□□□ 1.76
VPS16Q9H269 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS16Q9H269 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.04■■□□□ 1.76
VPS16Q9H269 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS16Q9H269 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms