Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
KRTAP3-1Q9BYR8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 AC008813.1-201ENST00000536597 885 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L13-201ENST00000554103 1267 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L15-201ENST00000611059 1267 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L23-201ENST00000615195 1269 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L24-201ENST00000617576 1269 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L22-201ENST00000618238 1269 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L20-201ENST00000619712 1269 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L21-201ENST00000622058 1269 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L10-201ENST00000622460 1267 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 DUX4L25-201ENST00000624915 1269 ntBASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-1Q9BYR8 AC068473.5-201ENST00000616428 2072 ntBASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 AC012676.1-201ENST00000574705 1949 ntBASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 MED25-210ENST00000612854 801 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 MED25-214ENST00000622402 642 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-1Q9BYR8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 HLA-V-202ENST00000446817 847 ntBASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 LINC01971-201ENST00000617888 1048 ntBASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-1Q9BYR8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
KRTAP3-1Q9BYR8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
KRTAP3-1Q9BYR8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC12.08□□□□□ -0.48
KRTAP3-1Q9BYR8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms