Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CBWD1Q9BRT8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CBWD1Q9BRT8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CBWD1Q9BRT8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CBWD1Q9BRT8 DUX4L18-201ENST00000553347 1267 ntBASIC26.13■■□□□ 1.77
CBWD1Q9BRT8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CBWD1Q9BRT8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CBWD1Q9BRT8 ATP5G2P3-201ENST00000429083 425 ntBASIC26.12■■□□□ 1.77
CBWD1Q9BRT8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CBWD1Q9BRT8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
CBWD1Q9BRT8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CBWD1Q9BRT8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CBWD1Q9BRT8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.1■■□□□ 1.77
CBWD1Q9BRT8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.1■■□□□ 1.77
CBWD1Q9BRT8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.1■■□□□ 1.77
CBWD1Q9BRT8 AC012354.3-201ENST00000623734 483 ntBASIC26.1■■□□□ 1.77
CBWD1Q9BRT8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CBWD1Q9BRT8 AC097639.1-201ENST00000565519 1891 ntBASIC26.1■■□□□ 1.77
CBWD1Q9BRT8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD1Q9BRT8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD1Q9BRT8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD1Q9BRT8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD1Q9BRT8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD1Q9BRT8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CBWD1Q9BRT8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CBWD1Q9BRT8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.09■■□□□ 1.77
CBWD1Q9BRT8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CBWD1Q9BRT8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.08■■□□□ 1.77
CBWD1Q9BRT8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.08■■□□□ 1.77
CBWD1Q9BRT8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
CBWD1Q9BRT8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CBWD1Q9BRT8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.07■■□□□ 1.76
CBWD1Q9BRT8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 RPS2P7-201ENST00000447334 885 ntBASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD1Q9BRT8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CBWD1Q9BRT8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CBWD1Q9BRT8 TSPY13P-201ENST00000338964 914 ntBASIC26.05■■□□□ 1.76
CBWD1Q9BRT8 AL033527.3-201ENST00000566366 1196 ntBASIC26.05■■□□□ 1.76
CBWD1Q9BRT8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.05■■□□□ 1.76
CBWD1Q9BRT8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CBWD1Q9BRT8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CBWD1Q9BRT8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CBWD1Q9BRT8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CBWD1Q9BRT8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CBWD1Q9BRT8 KRT18P10-201ENST00000388836 1287 ntBASIC26.03■■□□□ 1.76
CBWD1Q9BRT8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CBWD1Q9BRT8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.03■■□□□ 1.76
CBWD1Q9BRT8 AC020928.2-201ENST00000588717 2197 ntBASIC26.02■■□□□ 1.76
CBWD1Q9BRT8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CBWD1Q9BRT8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CBWD1Q9BRT8 AC087393.1-201ENST00000582896 145 ntBASIC26.02■■□□□ 1.76
CBWD1Q9BRT8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.02■■□□□ 1.76
CBWD1Q9BRT8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.02■■□□□ 1.76
CBWD1Q9BRT8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CBWD1Q9BRT8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.02■■□□□ 1.76
CBWD1Q9BRT8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CBWD1Q9BRT8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26■■□□□ 1.75
CBWD1Q9BRT8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26■■□□□ 1.75
CBWD1Q9BRT8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CBWD1Q9BRT8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CBWD1Q9BRT8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CBWD1Q9BRT8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CBWD1Q9BRT8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CBWD1Q9BRT8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
CBWD1Q9BRT8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.99■■□□□ 1.75
CBWD1Q9BRT8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms