Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.86■■□□□ 1.41
CPNE1Q99829 SLC6A10P-202ENST00000431994 2058 ntBASIC23.86■■□□□ 1.41
CPNE1Q99829 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE1Q99829 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CPNE1Q99829 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE1Q99829 AP003733.4-201ENST00000623785 1697 ntBASIC23.86■■□□□ 1.41
CPNE1Q99829 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPNE1Q99829 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
CPNE1Q99829 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.85■■□□□ 1.41
CPNE1Q99829 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.85■■□□□ 1.41
CPNE1Q99829 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPNE1Q99829 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CPNE1Q99829 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 MIR3960-201ENST00000583311 91 ntBASIC23.84■■□□□ 1.41
CPNE1Q99829 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CPNE1Q99829 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE1Q99829 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.83■■□□□ 1.41
CPNE1Q99829 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.83■■□□□ 1.41
CPNE1Q99829 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CPNE1Q99829 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPNE1Q99829 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPNE1Q99829 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPNE1Q99829 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPNE1Q99829 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.82■■□□□ 1.4
CPNE1Q99829 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPNE1Q99829 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPNE1Q99829 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPNE1Q99829 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE1Q99829 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.81■■□□□ 1.4
CPNE1Q99829 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CPNE1Q99829 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE1Q99829 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
CPNE1Q99829 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CPNE1Q99829 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE1Q99829 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE1Q99829 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE1Q99829 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE1Q99829 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.8■■□□□ 1.4
CPNE1Q99829 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE1Q99829 SMPD5-203ENST00000639008 1464 ntBASIC23.8■■□□□ 1.4
CPNE1Q99829 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.8■■□□□ 1.4
CPNE1Q99829 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CPNE1Q99829 MIR7108-201ENST00000614319 87 ntBASIC23.79■■□□□ 1.4
CPNE1Q99829 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPNE1Q99829 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPNE1Q99829 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE1Q99829 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE1Q99829 AC092296.2-201ENST00000589470 999 ntBASIC23.78■■□□□ 1.4
CPNE1Q99829 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE1Q99829 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE1Q99829 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE1Q99829 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE1Q99829 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.78■■□□□ 1.4
CPNE1Q99829 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE1Q99829 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPNE1Q99829 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPNE1Q99829 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.77■■□□□ 1.4
CPNE1Q99829 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.77■■□□□ 1.4
CPNE1Q99829 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.76■■□□□ 1.39
CPNE1Q99829 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPNE1Q99829 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
CPNE1Q99829 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CPNE1Q99829 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPNE1Q99829 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.75■■□□□ 1.39
CPNE1Q99829 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPNE1Q99829 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.75■■□□□ 1.39
CPNE1Q99829 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.75■■□□□ 1.39
CPNE1Q99829 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPNE1Q99829 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE1Q99829 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.74■■□□□ 1.39
CPNE1Q99829 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CPNE1Q99829 MIR639-201ENST00000384974 98 ntBASIC23.74■■□□□ 1.39
CPNE1Q99829 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE1Q99829 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE1Q99829 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CPNE1Q99829 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE1Q99829 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CPNE1Q99829 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CPNE1Q99829 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE1Q99829 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE1Q99829 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE1Q99829 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE1Q99829 LINC01124-201ENST00000409786 2117 ntBASIC23.73■■□□□ 1.39
CPNE1Q99829 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE1Q99829 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms