Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NEK1Q96PY6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NEK1Q96PY6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NEK1Q96PY6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
NEK1Q96PY6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NEK1Q96PY6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NEK1Q96PY6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NEK1Q96PY6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NEK1Q96PY6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
NEK1Q96PY6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.33■■■□□ 2.13
NEK1Q96PY6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.33■■■□□ 2.13
NEK1Q96PY6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NEK1Q96PY6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NEK1Q96PY6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NEK1Q96PY6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.32■■■□□ 2.12
NEK1Q96PY6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
NEK1Q96PY6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
NEK1Q96PY6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NEK1Q96PY6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.32■■■□□ 2.12
NEK1Q96PY6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.32■■■□□ 2.12
NEK1Q96PY6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.31■■■□□ 2.12
NEK1Q96PY6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.31■■■□□ 2.12
NEK1Q96PY6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NEK1Q96PY6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NEK1Q96PY6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NEK1Q96PY6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
NEK1Q96PY6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
NEK1Q96PY6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NEK1Q96PY6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NEK1Q96PY6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NEK1Q96PY6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
NEK1Q96PY6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NEK1Q96PY6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NEK1Q96PY6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NEK1Q96PY6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.28■■■□□ 2.12
NEK1Q96PY6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NEK1Q96PY6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NEK1Q96PY6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NEK1Q96PY6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NEK1Q96PY6 AL592293.1-201ENST00000502889 1188 ntBASIC28.27■■■□□ 2.12
NEK1Q96PY6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NEK1Q96PY6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
NEK1Q96PY6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
NEK1Q96PY6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
NEK1Q96PY6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
NEK1Q96PY6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.26■■■□□ 2.12
NEK1Q96PY6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
NEK1Q96PY6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
NEK1Q96PY6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
NEK1Q96PY6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
NEK1Q96PY6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.25■■■□□ 2.11
NEK1Q96PY6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
NEK1Q96PY6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
NEK1Q96PY6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
NEK1Q96PY6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.24■■■□□ 2.11
NEK1Q96PY6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.24■■■□□ 2.11
NEK1Q96PY6 U85056.1-201ENST00000616429 682 ntBASIC28.24■■■□□ 2.11
NEK1Q96PY6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
NEK1Q96PY6 AC022211.4-201ENST00000625094 2161 ntBASIC28.24■■■□□ 2.11
NEK1Q96PY6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.24■■■□□ 2.11
NEK1Q96PY6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
NEK1Q96PY6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NEK1Q96PY6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NEK1Q96PY6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.23■■■□□ 2.11
NEK1Q96PY6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NEK1Q96PY6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
NEK1Q96PY6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
NEK1Q96PY6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NEK1Q96PY6 SLC6A10P-202ENST00000431994 2058 ntBASIC28.21■■■□□ 2.11
NEK1Q96PY6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
NEK1Q96PY6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
NEK1Q96PY6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
NEK1Q96PY6 SPCS2P3-201ENST00000500401 656 ntBASIC28.2■■■□□ 2.1
NEK1Q96PY6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
NEK1Q96PY6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
NEK1Q96PY6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NEK1Q96PY6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NEK1Q96PY6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NEK1Q96PY6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
NEK1Q96PY6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.19■■■□□ 2.1
NEK1Q96PY6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NEK1Q96PY6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
NEK1Q96PY6 AC142381.3-201ENST00000568208 1670 ntBASIC28.19■■■□□ 2.1
NEK1Q96PY6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.18■■■□□ 2.1
NEK1Q96PY6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NEK1Q96PY6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
NEK1Q96PY6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.18■■■□□ 2.1
NEK1Q96PY6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
NEK1Q96PY6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NEK1Q96PY6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
NEK1Q96PY6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NEK1Q96PY6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
NEK1Q96PY6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NEK1Q96PY6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NEK1Q96PY6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NEK1Q96PY6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.16■■■□□ 2.1
NEK1Q96PY6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NEK1Q96PY6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NEK1Q96PY6 KRT18P10-201ENST00000388836 1287 ntBASIC28.16■■■□□ 2.1
NEK1Q96PY6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms