Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.97■■■□□ 2.71
NBPF4Q96M43 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NBPF4Q96M43 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
NBPF4Q96M43 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
NBPF4Q96M43 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NBPF4Q96M43 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NBPF4Q96M43 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.96■■■□□ 2.71
NBPF4Q96M43 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.96■■■□□ 2.71
NBPF4Q96M43 AC137630.3-201ENST00000607245 391 ntBASIC31.96■■■□□ 2.71
NBPF4Q96M43 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
NBPF4Q96M43 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NBPF4Q96M43 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
NBPF4Q96M43 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NBPF4Q96M43 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NBPF4Q96M43 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
NBPF4Q96M43 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
NBPF4Q96M43 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.95■■■□□ 2.71
NBPF4Q96M43 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
NBPF4Q96M43 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
NBPF4Q96M43 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
NBPF4Q96M43 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
NBPF4Q96M43 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NBPF4Q96M43 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
NBPF4Q96M43 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NBPF4Q96M43 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.93■■■□□ 2.7
NBPF4Q96M43 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.93■■■□□ 2.7
NBPF4Q96M43 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NBPF4Q96M43 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NBPF4Q96M43 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
NBPF4Q96M43 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.92■■■□□ 2.7
NBPF4Q96M43 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NBPF4Q96M43 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
NBPF4Q96M43 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.92■■■□□ 2.7
NBPF4Q96M43 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
NBPF4Q96M43 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NBPF4Q96M43 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
NBPF4Q96M43 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NBPF4Q96M43 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.91■■■□□ 2.7
NBPF4Q96M43 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NBPF4Q96M43 AC021242.3-201ENST00000607598 1377 ntBASIC31.91■■■□□ 2.7
NBPF4Q96M43 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.9■■■□□ 2.7
NBPF4Q96M43 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NBPF4Q96M43 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.89■■■□□ 2.7
NBPF4Q96M43 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.89■■■□□ 2.7
NBPF4Q96M43 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.88■■■□□ 2.69
NBPF4Q96M43 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NBPF4Q96M43 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NBPF4Q96M43 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.88■■■□□ 2.69
NBPF4Q96M43 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.88■■■□□ 2.69
NBPF4Q96M43 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.88■■■□□ 2.69
NBPF4Q96M43 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
NBPF4Q96M43 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
NBPF4Q96M43 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.87■■■□□ 2.69
NBPF4Q96M43 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NBPF4Q96M43 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NBPF4Q96M43 AC008406.3-201ENST00000620001 1374 ntBASIC31.85■■■□□ 2.69
NBPF4Q96M43 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NBPF4Q96M43 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.85■■■□□ 2.69
NBPF4Q96M43 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
NBPF4Q96M43 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.85■■■□□ 2.69
NBPF4Q96M43 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NBPF4Q96M43 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.84■■■□□ 2.69
NBPF4Q96M43 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.84■■■□□ 2.69
NBPF4Q96M43 KRT16P3-201ENST00000439127 1283 ntBASIC31.84■■■□□ 2.69
NBPF4Q96M43 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NBPF4Q96M43 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.83■■■□□ 2.69
NBPF4Q96M43 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.83■■■□□ 2.69
NBPF4Q96M43 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.69
NBPF4Q96M43 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NBPF4Q96M43 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
NBPF4Q96M43 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NBPF4Q96M43 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NBPF4Q96M43 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NBPF4Q96M43 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NBPF4Q96M43 TSPY9P-201ENST00000440215 945 ntBASIC31.81■■■□□ 2.68
NBPF4Q96M43 TSPY11P-201ENST00000442607 1045 ntBASIC31.81■■■□□ 2.68
NBPF4Q96M43 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.81■■■□□ 2.68
NBPF4Q96M43 AC142086.6-201ENST00000621154 1765 ntBASIC31.81■■■□□ 2.68
NBPF4Q96M43 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NBPF4Q96M43 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NBPF4Q96M43 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NBPF4Q96M43 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.8■■■□□ 2.68
NBPF4Q96M43 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.8■■■□□ 2.68
NBPF4Q96M43 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.8■■■□□ 2.68
NBPF4Q96M43 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NBPF4Q96M43 MIR4281-201ENST00000580852 62 ntBASIC31.8■■■□□ 2.68
NBPF4Q96M43 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
NBPF4Q96M43 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NBPF4Q96M43 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NBPF4Q96M43 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
NBPF4Q96M43 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.79■■■□□ 2.68
NBPF4Q96M43 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
NBPF4Q96M43 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
NBPF4Q96M43 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
NBPF4Q96M43 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NBPF4Q96M43 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
NBPF4Q96M43 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.78■■■□□ 2.68
NBPF4Q96M43 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NBPF4Q96M43 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NBPF4Q96M43 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms